Acanthopagrus latus (yellowfin seabream): 119021643
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Entry
119021643 CDS
T08233
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119021643 (arhgef10la)
03036 Chromosome and associated proteins [BR:
alat03036
]
119021643 (arhgef10la)
Membrane trafficking [BR:
alat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119021643 (arhgef10la)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
119021643 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
SOS1_NGEF_PH
Beta-prop_RSE1_2nd
DUF7675
IQ_SEC7_PH
RHG20_PH
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
119021643
NCBI-ProteinID:
XP_036957931
LinkDB
All DBs
Position
6:6334473..6457742
Genome browser
AA seq
1297 aa
AA seq
DB search
MSTVMSQPPPKEDEEEEDEEHGEEFTFEDTDEEKLQEDGKGIESGAVGSVQVPKQGSDET
SDGALKTDTGSTQTSPPAGQEGAANTDVASVSTADVPVNESPSWAATAAAAAAAAEPGNS
APCAGKELRGLPAGPSAVETPANSGDRGTEIVKESSGSREISEALCVTEAEPQAADASEV
IYDDVPSEDPLSPDDDMIYEDVQRDSGPVAADNGWSSSEFESYDEHSDNETKVPTRSKLS
PEVRRLRDRCAKTKRELAMRLSGKHNYDIKVQQLMKAARSGTKDGLEKTKIAVMRKVSFL
QRKDQLEEEDDAGYLDVAVSEDKHPPPQLSPMPEGLTSHQVVRRHILGSIIQSERSYLES
LRRILQEYHRPLMEADPRILSPRKIRPIFYRIREITQCHSMFQIALASRVAEWDSSEKIG
DLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKKKQASSVDRITLYGL
MVKPIQRFPQFILLLQDMLKNTPKGHVDRLPLQLALTELEMLAEKLNEQKRVADQIAETQ
QLARSVSDRLLSKQLNSEQGSLVLCETLIETVYGERGQVLKSKERKVFLFDDVLICANIN
VKGPPDISSLVPIGPKYTMKWSAPLQQVQVVEVGQEGSQSKDTLFQQSGAKRPGSVCTSG
KAILGPPRLYQELQELQHDLSVVEEVTLLVGTLQGMYQNLNTTVAQDWCLALQRLIRIKE
EQIQSANKCRLRLQVPGRPDKSGRPVSFMVVLNTPNPLSKISWVNRLHLAKIALREENSP
GWLYGEDEGKTMAPLWCPLLASHMPVFATKSPERKLEAALHNPVHCALLGFSAASTSLPQ
GYLWVAGGGEGSQGQIEIFSLNRPMPRAVKSLQVGAAVRCLEYVPEPSPSEEEEAGGHRA
PSGIGANICVGSDDGRVLVYGSVDTAAQCLLTLHNPEGCPVLCLKHSSRFLFAGLRNGTM
MVYGRSSRDDLWDPDSRRCVSLGSEPVRTLLVLDDSVWASCGNSVTVMDISSLTTQKFEV
HPDPMVSVAHMARAGGGVWMAFSEGSSIRLFHTETLELLQEINISTRSTLLNTGQKSIRV
TSLLICQGLLWVGTAQGLIITLPVPKLEGIPKITGKGMVSLNAHCGPVDFLVATTSTLSP
DLLKRDSVVDGPDSACGGEDRSDTSSQESLQQSSSYHSEGRGKGRGVLLQYKLRSTSGLP
GRPLTALADEASDSSLESLEHSVEDGSIYELSDDPEMWVRGRPCERDGGRRDRVISAAVI
SGGKGFRRLKEGAAVGTRTSGEGLENILMVWQLPLTV
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgtgatgtctcagccaccaccaaaggaggatgaagaggaggaggatgaagag
cacggggaagagtttacattcgaggacacggatgaggagaaacttcaggaggacggcaaa
gggatcgagtctggcgctgttggatccgtccaggtgccgaaacagggcagcgatgagacg
tcagacggggcgttaaaaacagacacgggcagcacgcaaacatcgcctcctgctggacag
gagggagctgccaatacggatgtggcttcagtttctactgcagatgttccagttaatgag
tcacccagctgggccgcgacagcagcagcagcagcagcagcagctgagcctggtaactca
gctccttgtgcggggaaggagctccgggggcttcctgcggggccgtcagctgtggagacg
ccggctaattcgggagaccgcggcacagaaatcgtcaaggaaagctccggctccagggag
atctctgaagctttgtgtgtgactgaggccgagccacaggcggcggacgcttcagaggtg
atctacgatgacgttccgagcgaggaccccctctctcccgatgacgatatgatatacgag
gacgttcagagagacagtggtcccgtggcagctgacaacggatggagctccagtgagttt
gaaagctatgacgagcattccgataacgagaccaaagtaccaacgcggagcaagctctct
cctgaagtgcgacggctgagggatcgctgtgccaagaccaaacgcgagctggccatgagg
ctctctggcaaacacaactatgacatcaaggttcagcagctcatgaaggcggcgaggagc
ggaacaaaggatgggcttgaaaagaccaagatagccgtgatgcgaaaagtttccttcctg
cagaggaaagatcaattggaagaggaggacgatgcaggatacctggatgtggctgtgtca
gaagacaagcatcctcccccgcagctgagccccatgccagaggggctgaccagccaccag
gttgtcaggcgccatatcctcggctccatcattcagagcgagcggagctacctggagtct
ctcaggaggatcctgcaggaataccacagaccactgatggaagctgatccacgcatcctg
agcccgaggaagatccggcctatattttaccgaatcagggagatcacgcagtgccactcc
atgttccagattgcgctggcgtcgcgtgtggctgaatgggacagcagcgagaaaatcgga
gacttgtttgtcgcctcgttttccaagtccatggttctggatgtatacagtgattacgtg
aacaacttcaccaacgccatggctctcataaagaaggcgtgcatgtccaagccagctttc
ctggaattcttaaagaagaagcaggcgtctagtgttgaccggatcaccctgtacggcctg
atggtgaagcccatccaacgattcccgcagtttattttgctcctgcaggacatgctcaag
aatacaccgaagggccacgtggaccgtctgcccctgcagctagctctgacagagctggag
atgctggctgagaagctgaatgaacagaaacgagtagctgaccagattgcagagacccaa
caactggcccgcagcgtcagtgatcgcctgctcagtaagcaactcaactcggagcagggg
tcactggtcctttgtgagacgcttattgagactgtgtatggcgagcggggacaagtcctg
aagtcgaaggagagaaaggtcttcctctttgatgatgtgctcatctgtgccaacataaat
gtcaaagggcctccggatatcagcagcctggtccccatcggccccaagtacaccatgaag
tggagcgcccccttgcagcaggtgcaagtggtggaggtggggcaggagggctcccagagc
aaagacaccctcttccaacagagcggagccaagcggccgggcagtgtctgcacttcaggt
aaagcgatcctggggcctccgcggctctaccaggagctgcaggagctccaacatgacctt
tccgtcgtggaagaagtcactctcctcgtgggcacgctgcaggggatgtaccagaacctg
aacaccactgtggcgcaggactggtgtctggctttgcagaggcttattcgtatcaaagaa
gaacagatccagagtgcgaacaaatgtcgcttacgcctgcaggtgcctggcaggccggac
aagtcagggcgtcctgtcagcttcatggtggtcctcaacactccaaacccccttagtaag
atctcctgggtaaaccgtctgcacttggccaagattgccctacgagaggagaattcacca
ggatggttatatggagaggacgaagggaagacgatggccccgctgtggtgtccgctgctc
gccagtcacatgcccgtcttcgccacaaagtcacccgagagaaagctcgaagctgccctc
cacaatcctgttcactgtgcattgctgggcttctctgctgcgagcacctccttacctcaa
ggctacctctgggtggctggcggaggagaaggctctcaggggcagatagagatattttcc
ctcaacaggcccatgccaagagctgtaaagagcctgcaggtcggcgccgctgtccgatgt
ctggagtatgtgccagaaccctccccgagtgaagaagaggaagccggaggtcacagggcc
ccctcggggatcggcgccaacatttgtgtcggatcagacgatgggcgcgtcctggtctac
ggcagcgtggacaccgcggcacaatgcctattgaccctccataacccagagggctgccct
gtgctgtgcctcaagcactcctcgcgcttcctgtttgcaggcctgcggaacggaaccatg
atggtttatggaagaagtagcagggatgacctctgggaccctgactcccgcagatgtgtg
agcctgggctcagaaccagtgcggactctgttggtgttagatgactcagtgtgggcgagc
tgcgggaactcggtcacagtcatggacatctccagcctcactactcagaagtttgaagtc
catccagacccgatggtcagcgtggcgcacatggcgcgcgccggtggaggcgtgtggatg
gcgttctccgagggctcgtccattcgtctcttccatactgaaacgctggagctcctgcag
gaaatcaacatctcaacacgctcgacgctgctgaacaccggtcagaagagcatacgagtc
acgagtctcctgatttgccagggactgttatgggtgggcacagcccaaggcttaattatc
actcttccagtccccaaactggagggcatccccaaaataacaggaaagggaatggtgtct
ctaaatgcacactgtgggcctgtggacttcctggtagccaccaccagtactctgtctcct
gacctgctgaagagggattccgtcgtggacggcccagactcggcctgtggaggcgaggac
cgcagcgacacctcctctcaggaatccctgcaacagtccagctcctaccacagcgagggc
agaggcaaaggacgcggcgtcctgctgcagtacaagctgcgctccacgtcaggactgcct
ggacggccgttaacggcactggccgacgaggcgtcggactcctccctggagtctttggag
cacagtgtggaagatggatctatctatgagctgagcgatgacccagaaatgtgggttcgg
ggacgtccttgtgagagggacgggggacgcagggacagggtgatctctgcagcggttatc
tctggaggcaagggcttccgtagactgaaggagggagcagcagtaggtacgaggacaagt
ggggagggtttagagaatattctaatggtatggcagctcccgctcacagtgtaa
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