Acanthopagrus latus (yellowfin seabream): 119021644
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Entry
119021644 CDS
T08233
Symbol
sycp1
Name
(RefSeq) synaptonemal complex protein 1 isoform X1
KO
K19533
synaptonemal complex protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119021644 (sycp1)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
119021644 (sycp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCP-1
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
119021644
NCBI-ProteinID:
XP_036957936
EnsemblRapid:
ENSALTG00010023287
LinkDB
All DBs
Position
6:complement(8912438..8926505)
Genome browser
AA seq
1040 aa
AA seq
DB search
MDRDRGFNFKLLVPPRVNNGQVSAVRPQEIIESCGDFMNKLQQGNSKCYDKEQSMPFPNM
SMVVPTKPTRQEFPKMKVVPPMEKDMNNCNPGQLYCKLFDEVEKIKCWKVKADSDTVHKE
RRLQENKRTIETQRKAIQELQFGNESLSLKLEEQISENEDLRNKNNATRNLCNILKDTFE
RSSKKMHLFESEREETHHILMENSESIQKLIAAFESLRMRAEADQQEMQKVKEDLLQFES
LKEKHHQEYNMKEREVAVLQTKLKDKESELQKLLLDLHETQKHCKQLQEETEEQYELLKS
LKTERESVLQELHTTEQCCKETEKKHDAIAAMLEKSKEEYAQMIKSKDLNLEELRKVRNQ
QAEKLEQIQTTIQELQNSLAFETQRASELEDKLVANDMDLKKSSTSLEVTMEQSAKKDGK
IKILEDELDKKSKSIESMKGKIDVTEVRVEELTAELLKKTEEVQLLKTEAEAAFAESDEL
KKACEAAEKAHEDLKQKTKVTEIQVKELKGELITEKEKNKENTFQIDQLRKAIVHHETKY
KELLSNFDELQSEKTAIQQQFENASSNAKAILANMKESEDKAAKLTTEIQRVEEENQCLR
EELNSIKTEIQRETPQNKLEDHCEHLQEEIIGKEKEIKALATKLCNVRKNFEIKLKAQEE
YKKENKMLKKQIAKETAKFSQLENEVNGLQEESQKLRRLNKEDYLKFQRELESKSTFAEE
LKNEVQKLKVTAAEAVKNKEDAELKCQHKIADMVALMEKHKSQYDRMVEQKDAELDENRK
KEREAVACRKSLEVDLEKHKTDKDQLKQQLKTEVAEKENLQKELTDLKNEMSSMKSSQLS
EVINKQSPASNYKQGKSSVTPKESSAKRHVFSFSKTRKTPSYSKDDGNAAVMKKADSDCD
FIKTSARTTPKTKKIQNGNPETPSIMTNRVGGTSKIKSYRIRTPPSSLTACWEKNTIELD
PRSDSSDQNDILSFAHAPAPKSSAPTSKLNSLQNIQSPVSHKSPGNSLKLAAMKRMRDAG
WTAVTGCDKKKKKSSERVFA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggacagagaccggggttttaacttcaaactgttggtacctcccagagtgaataatgga
caggtatctgctgttcgacctcaggaaatcattgagagttgtggtgatttcatgaataag
ttgcagcagggtaacagtaaatgttatgacaaagagcagagcatgcctttccccaatatg
agcatggttgtaccaacaaaacctaccagacaagagtttcctaagatgaaagtcgtgcca
ccaatggaaaaagacatgaacaattgcaatcctggacagctttattgcaagctgtttgat
gaagttgagaaaattaagtgttggaaggtcaaagctgacagtgacactgtgcacaaggaa
aggagactacaagaaaacaaaagaacaattgaaactcaacgcaaagccattcaagaattg
cagtttggaaatgaaagtctcagcttaaagctggaggaacagatcagtgagaatgaggat
ttgaggaacaagaacaatgcaacaaggaacttgtgcaatatcctcaaagatacttttgag
cggtcatccaagaaaatgcacttatttgaatccgaaagagaagaaacacatcacatcttg
atggaaaatagtgaaagcattcagaaactaattgcagcttttgaaagccttcgtatgcga
gcagaagccgatcagcaagagatgcaaaaagtcaaggaggacctgctgcagtttgaaagt
ctgaaagagaaacatcatcaagaatataacatgaaagagagagaggttgctgtgcttcag
acaaaactcaaggacaaggaaagtgaactacaaaaactcttgcttgaccttcatgaaacc
cagaagcactgcaaacagcttcaagaagaaacagaagaacagtatgaacttctcaaaagc
ttaaaaactgaacgagaatccgttcttcaagagctgcataccacagagcagtgctgcaaa
gaaactgagaaaaaacatgatgctattgctgcaatgctggaaaagagtaaagaagaatat
gcacagatgattaaaagcaaagacttaaacttggaggagctcaggaaagtccgaaatcaa
caagcagagaagctggagcagattcagacaacaattcaggagctacagaattcactagcc
ttcgagacacagagggccagtgaacttgaggataaacttgtggcaaatgacatggacctt
aaaaaaagcagcacatctttagaagtgaccatggagcagagtgcaaagaaagatgggaag
atcaaaatacttgaagatgaactggacaaaaaatcaaaatccattgagtctatgaagggc
aagattgatgtcactgaagtcagagtggaggaactcacagctgagcttttgaagaaaact
gaagaagtccagctattaaagactgaagcagaggctgcctttgctgaaagtgatgaactg
aagaaggcttgtgaagctgctgaaaaggcacacgaagatttaaagcagaagactaaagtg
acagagatccaagtaaaggagctaaagggagagctaattactgaaaaagagaaaaataaa
gaaaacacctttcagattgatcaactgaggaaagccattgtgcaccatgaaacaaagtac
aaagagctcttgtctaactttgatgagctgcagtctgagaagacagccattcaacagcag
tttgagaatgcatcatctaatgcgaaagctattctggctaacatgaaggagagtgaggat
aaggctgcaaagctcacaacagaaattcaaagagtggaagaagaaaaccaatgtttacga
gaggaattaaactccattaaaactgaaatccaaagggagactccgcagaataaacttgaa
gatcattgcgaacatctgcaggaggaaattataggaaaagaaaaagaaatcaaagctctg
gcaacaaagctctgcaatgtcaggaaaaattttgaaatcaagctcaaagcccaggaggaa
tacaagaaagaaaataaaatgcttaagaaacaaatagcgaaagagactgcaaaattcagt
caacttgaaaatgaggtcaatggtcttcaagaggagtcccagaaacttaggagactgaac
aaggaagactatctgaaattccagagggagcttgagtccaagtcaacctttgcagaagag
cttaagaatgaggtacaaaagctcaaagtaacagcagcagaggctgtcaagaacaaggaa
gacgcagaactcaagtgtcaacacaagatagcagatatggtcgcactgatggaaaaacac
aagagccagtatgaccggatggttgaacaaaaggatgcagagcttgatgagaacaggaag
aaagagagagaggctgtggcctgtaggaaatcactggaagtggatcttgagaagcacaag
actgataaagatcagctgaagcaacagctgaagacagaagtggcagagaaggaaaacctc
cagaaagagctcactgatttgaagaatgaaatgtcatccatgaaaagctctcagctgtca
gaagtgataaacaagcagtcacctgcctcaaactataaacaagggaagagttcagtgact
ccaaaagagagctctgcaaagagacatgtgtttagcttctccaagaccaggaaaactccc
tcctacagcaaggatgatggaaatgctgcagttatgaagaaagctgactctgactgtgac
ttcatcaaaacatcagctagaacaacaccaaagaccaagaaaattcaaaatggaaacccg
gaaaccccaagtataatgacaaacagggttggcggaacatcaaagatcaaatcctacaga
attagaacacctccttcttctctgactgcgtgctgggagaagaacaccatagagcttgac
cccaggtctgacagctctgatcaaaatgatatcttgagctttgcacatgcacctgcgcca
aagtcttctgctccaacctccaaactcaacagcttgcaaaacattcagagccctgtcagt
cataaatcaccagggaactccttgaagcttgctgcaatgaaaaggatgagagatgctggt
tggacagctgtaactggctgtgacaaaaaaaagaagaagagcagtgagagggtctttgcc
taa
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