Acanthopagrus latus (yellowfin seabream): 119021716
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Entry
119021716 CDS
T08233
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04260
Cardiac muscle contraction
alat04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119021716
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119021716
04261 Adrenergic signaling in cardiomyocytes
119021716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119021716
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119021716
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
dCache_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
119021716
NCBI-ProteinID:
XP_036958078
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Position
6:complement(15979016..16022589)
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AA seq
1094 aa
AA seq
DB search
MAIGKRSCSIVCLVSIQIIFSASWPGAAGLTFPQQYTIMHWARRIEQEIDRVFQHITGAQ
QLKGIYNEERRRFSLVRNQPRKIVEKVASDIEKLLAKKRKALDRLASEAERLQREHLWQD
GIKELDMAYYDSKAELDYYSMDGEGEVENPSHIKLEFVYDPNFKNNVNYSYTAVQIPTDI
YKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPATPWKAPDKIDLY
DVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARFNE
KAEAVVPCFKHLVQANVRNKKIFKDAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRANC
NKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYFEI
RSICAIRINTQEYLDVLGRPMVLAGSDAKQVQWTNVYQDALGLGMVVTGTLPVFNLTMDG
KSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPNLKPKLVNLPEP
VTLDFLDAEVEDSNKEEIRRQMIDGKPGEMQVKTLIKSIDEQYIDEVFRGYTWTPINGTD
YSLGLVLPPYNEFYIQADLSDVMLQLQYMQSLLPSSFESAGHVFLAPREYCKRLHLSDNN
TQFLQNFLSLMLDISPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLAVFAS
TDGGITRVFPNIAAELWDEDPEPFNSNYYRRSLDNKGYMFRAPPKSTLDDPVGSENGTVG
ILVTSAVEVNLGGKLLKPSVVGVKLDLEAWVDKFKILASNVSDSRQGSHKCGPSRSCEMD
CEVNTDDLLCYLIDDGGFLVMSNQRDHWKKIGLFFGDVDPYLMHALYNNSIYTRRQSFHF
QSACEPVSSSHTGAAPRGIFVPSIADVLSLAWWTSTVAWSVTQQLLYGLAYNSWLYQDDV
LVDGFEMKESSCVTIQSQFYFTNTTNSYNMLQDCGNCSRLFHAKRIENTNLLFVVAETLP
CSSCEIERLTQVRTEFQEENPCEVLSNARYRKGPTSCFDYSALENTSECGRGHALQSSIG
VLLFIQLILPLFHL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcaaaaggtcttgcagcatcgtctgcttggtatctatccagattatcttc
agcgcatcgtggcctggagcggcggggctcaccttcccccagcagtacacgataatgcac
tgggccaggcgcatcgagcaggagattgacagagtctttcagcacatcactggagctcag
cagttgaaagggatatacaatgaagagagacggcggtttagtctggtgaggaatcagcct
cggaagattgtggagaaggttgcttcagatatcgagaaactcctggctaagaagcgcaaa
gctctcgacaggttggccagtgaagcagagcggctccagcgagagcatctgtggcaggat
ggaataaaggagctggacatggcttattatgactcaaaggcagagctggattattattcc
atggacggagaaggcgaggtggaaaatccttcgcacatcaagctggagtttgtgtacgat
ccgaacttcaaaaacaacgtcaactactcctacacagctgttcagattcccacagatatc
tataaaggagctccagtcattctgaatgagctgaactggacgcaggcgcttgagaaagtg
ttcatggaaaacagtcaggaggatccgtctctgctgtggcaggcgttcgggagtgcgaca
ggtgtcactcgctactacccagctacgccttggaaagcccctgataaaatcgacttgtat
gacgtcaggaggaggccctggtacatccagggagcctcgtctcccaaggatatggtcatt
ctggttgatgtgagcggcagcgtcagcggactcaccctgaaactgatcaaagcatcagtg
atggaaatgctggacactttgtctgatgatgactacgtcaacgtggccaggtttaatgag
aaggccgaggctgtggttccctgcttcaaacatctcgtccaggctaacgtgcgcaacaaa
aagatcttcaaggatgcagtgcagcagatgcaggctaaaggcaccacagactacaagtct
ggatttcattttgctttcaaccagctgttaaataagacgaatgtccctcgagccaactgc
aataaaataatcatgctgtttactgatggaggagaggacagagctcaggatgtcttcatg
caatacaactggcccaacaaaacagttcgggttttcaccttttctgtgggtcagcacaac
tatgatgtcacacctttacaatggatcgcatgcaccaataaaggttactattttgagatc
cgttccatctgtgctataaggattaacacccaggagtacctggacgtgctgggacgcccc
atggtcctggcaggcagcgatgccaagcaggttcagtggacaaatgtgtatcaggatgct
ttgggtctggggatggtggtaactgggactctgcctgtatttaatctcaccatggacgga
aagtcacagaatcagctgatattaggtgtgatgggagtcgacgtgcatcttgatgagata
aagcgtctgacaccacggtacaatcttggagccaatggatacatatttgctattgatcca
aatggatatcttctcctccatcctaatctcaagccaaagctggtgaacctccctgagcct
gtgacactggacttcctggatgcagaggttgaagacagcaataaagaggagattcggcgg
caaatgattgatggaaaaccgggtgaaatgcaggtcaaaactctcattaagtccattgat
gagcaatacattgacgaggtgttcaggggttacacctggactcctatcaacggcacagat
tacagcctcggtctggtgttacctccctacaatgaattctacatccaggcagacctgagt
gacgtgatgctgcagctccagtatatgcagtcgttgctgcccagctcatttgaatcggca
ggacacgtgtttctggctccaagagagtactgcaaacgtctgcatctttctgacaacaac
acacagtttttgcagaacttcctctcgctcatgctggacatctccccagaatctgatgag
tgtgaccaaggcctcatccacaacctgattttggattcgaggattatcgggcagctggcc
tctcgtgtttggaagaacaaagatctgaattcgtacggcttcctggctgtatttgcctct
accgatggaggaattacacgggtgtttccgaacatagctgctgagttatgggacgaagat
cctgaacccttcaattcgaattactacagacggagcctcgacaacaaaggctacatgttc
agagctccaccgaaatccaccttggatgatcctgttggttcggaaaatggcactgttgga
attctggtaacttccgctgttgaggtgaatttaggaggcaaactgctgaaaccttcagtg
gtcggtgtgaagctggatttggaagcgtgggtggacaagtttaagatcctggccagcaat
gtgtcagacagtcgacagggctcacacaagtgcggaccgtccaggagttgtgagatggac
tgtgaagtgaacactgacgacctcctctgctatctcatcgatgatggtgggttcctggtc
atgtccaatcagagagatcactggaaaaagattggtcttttctttggcgacgtggacccg
tacctgatgcacgcgctctacaacaactcaatctacacccgtcgtcagtctttccacttc
cagtccgcatgtgagccggtcagcagcagccacactggtgcagcacccaggggcatcttt
gtgccgtccatcgctgacgtcctcagcttggcgtggtggacatccacagtggcatggtct
gtgacccagcagctactgtacggactagcctacaacagctggctctaccaagatgatgtc
ctggtcgacggctttgagatgaaggaaagcagctgtgtgaccatccaaagccagttctac
ttcacaaacaccaccaactcctacaacatgctgcaagactgtggaaactgctcacggctg
ttccacgccaagcggatagaaaacacaaacctcctgttcgtggtcgctgagacgctcccc
tgcagctcatgtgagatagagagattgacacaggtcaggacagagttccaggaggagaat
ccatgtgaagtactgagcaacgcacgatatcgcaaaggcccgacttcctgctttgactac
agtgccttagaaaacacgtcagagtgtggacggggtcacgctctgcagtcgtccatagga
gtccttctctttattcagcttattctgcctctttttcatctctga
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