Acanthopagrus latus (yellowfin seabream): 119021742
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Entry
119021742 CDS
T08233
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119021742 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119021742 (gli1)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
119021742 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
119021742
NCBI-ProteinID:
XP_036958111
LinkDB
All DBs
Position
6:11642440..11696482
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AA seq
1488 aa
AA seq
DB search
MPVDMQPHQGLYHYETSPSQPSRGLVPSDQSPYSDVSSLRAPLLNGPPQDCRTMYNPMTP
SMTHGSGPGQGIGHCMDQYMRPPQAPPPHSMMGHRGMPPTECGNSTPYCNQNNMMSSHHN
FCQIQPGSDQIGSGDGRMSFSTVKCSRFSTPRSMLKLSKKRALSISPLSDASVDLQTVIR
TSPNSLVAFVNARCNPNGASSYGHLSVSAMSPSLGYSSNINCQSRQQGSMYGGGGGTPLG
GHTPGPCQASRLPPHNPRLLAPPKHGHLKTEPGLGGVMDGMNVKSLEERSEGDVASPSST
GTQDPLLGLLDGRDDLDKEDGKIEQEAIYETNCHWESCNKEFDTQDQLVHHINNEHIHGE
KKEFVCHWQECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRS
HTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVK
TVHGPEAHITKKHRGDTGPRPPGSAMTPGGQSSELLMEKEETRREDCKLLAPETALKSQP
SPGGQSSCSSERSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGVAGGGGGGGGGEPGSV
AGTMGMSAQALKRLENLKIDKLKQIRRPTPPARCGNTKLPALPGPGESMGMCAPSPLLSN
RRVMELSNHELGSGTAIGCSSSDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSDVSQM
GGTPGGGCHLLGPEQSGGDPLSPETNRRGAPCPGGGLPGLPNLTPAQQYSLKAKYAAATG
GPPPTPLPNMEQAATPGRRGGILSEYQGQPLPPFLQQVGPRRHSANTEYGTGVIYPHQAP
GNNSRRASDPVRSVADPQALPKRFNSLNNVAMMGRRNALQHRSDSSLARHMYSPRPPSIT
ENVMMEAMGMEPHLAPVDARDRSLMMPPGERSFMGYQQQHQTLGGAGGGGPLSNQLSPSH
DSLSCPDQAYMQGHYQNQGGEVPSRAGGNSIGQVRPIHSEGMSNTLLQQAEYSMSTCQLS
PSGPHYPGIGQGGDAGGTWSDTHNQIQSSSHALQNQRGMPYSDATLQPQQTPTHFNNQQA
LYNSPDGTHKLIIKPEQQFHPGMGGGDACQSAKLQQQRMLLQQTQGYPQQTGQVMMRNSN
NPSCDFQGQNQNSFPSGGGLSLGCAGTSLAEGQRSETPMMQVKEMMVRNYVQSQQALMWE
QQQEQQQQSGIKPPPLSDNMDMSAQTAMMQHSPQHQNQNLYSSQTYPSYPNQNLVMSPPS
HSSVTPKDQQLQGSCYGQEMVVPRPPQGRKPLSRQNSLSQVGGVYLGSPPHLSPVHSTTS
PRRAVRLPPVQHPQHPQNEMFSPSNNNNMYYSGQINMGMEKHTDPQNGPCLNQQHSMGSN
LDPTVGTKSAPYPQSGPISNALENLDLDNARIDFTSIIDDAEPSSFSPVNNPLQGQPGSS
SQASSRLTTPQTSVSLAAGSGLSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacaccaggggctgtatcactatgagacttcacccagccag
ccctccagaggcctagttccatcagaccagtctccctacagtgatgtgtcctcgctgcgt
gccccgctcctcaacggccctccccaagactgcagaactatgtacaaccccatgactccc
agtatgactcatggctcaggaccaggacaagggatcggccactgcatggatcaatatatg
aggccccctcaggccccaccgccgcatagtatgatgggccacaggggcatgccgcccaca
gagtgtggaaatagcaccccctactgtaaccagaacaacatgatgtcgtctcatcacaac
ttctgccagattcagcctggctctgatcagattggctcaggcgatggtaggatgtcattc
tccactgttaaatgctcaaggttctccacacctcgctccatgctcaagctgagtaaaaag
agggctttgtccatctcccctctttctgatgccagtgttgacctgcagacggtgatccgg
acatcaccaaactccttggtggcctttgttaacgctcgctgcaaccccaatggtgccagt
tcttacggccatctctctgtgagcgccatgagcccgtccctcggctattccagcaatata
aactgccaatccaggcagcaaggttccatgtatggaggaggtggagggacacctctgggt
ggacacacaccaggtccctgccaagcctcccgcttacctccccacaatcctcggctcctc
gctccacccaagcatggacacctgaagacagagccaggcctgggaggtgtgatggatggc
atgaatgtgaagagcctggaggagaggtcagagggagatgtggccagtccttcctccact
ggcactcaggaccctctccttggtctgctggatggcagagatgacttggacaaggaggac
gggaagattgaacaagaggccatctatgaaactaactgccactgggagagctgcaacaag
gagtttgacacacaggaccagctagttcaccacatcaacaatgagcacatccacggagaa
aagaaggagtttgtgtgtcactggcaggagtgctcccgagaacagaggcctttcaaagcc
cagtacatgctggtggttcacatgcgcagacacacaggagagaagccacacaagtgcact
tttgaaggctgtaataaggcctactctcgcctggagaatttaaaaacccacctgcgctct
cacactggagagaagccatatgtgtgtgaacatgaaggctgtaacaaagccttctcaaac
gcttcagaccgagccaagcaccagaaccgaactcactccaatgagaaaccttatgtgtgt
aagatccccggctgcactaaacggtacacagatcccagctctttgcgtaaacacgtgaag
acagtgcatggccccgaagcccacatcaccaagaaacatcgtggagacacaggacctcgc
ccccccgggtcagcaatgactcctggaggccagagctctgaactgttgatggagaaagag
gagacacgcagggaggactgcaaactgttggctcctgagacagctctgaaatcccagcca
agtcctggaggtcagtcatcctgcagtagcgagcgttctccactggggagtgccaataac
aatgacagtggggtggagatgaacctgaatgcagcaggcagtctggaggatctcacagca
ctggaggatggtgtagctggtggaggcggaggaggaggaggaggagagccaggaagtgta
gcaggaactatgggaatgtcagcacaggctttgaagaggctggagaacctgaagatcgac
aaactgaagcaaatccgcagaccaaccccccctgcccgctgtggcaataccaagctaccc
gcactccctggtccaggtgagagtatgggaatgtgtgcgccttctccactcctctcaaat
cgacgagttatggagctgtccaatcacgagttaggaagtggcacagcgattggctgttct
tctagcgacaggagaggaagcggcaccagcagcctcagctctgcatataccgtcagccgt
aggtcatccatggtgtctccttacctgtccagccggcgttccagtgatgtttcacaaatg
ggaggaacaccagggggaggatgtcaccttcttggcccagagcagagcggaggagacccc
ctctcgcctgagaccaatcgcagaggagccccatgtcctggaggaggattgcctggtctt
cctaatttaacacctgcccagcaatacagcctaaaggccaaatatgctgcagcaactggt
ggaccaccacccactcctttacccaatatggagcaggcagctactcccggcagaagagga
ggtattttaagcgagtaccaggggcaacctctgcctcctttccttcaacaagttggtcca
cgtagacacagtgccaatacagagtatggtactggtgttatctaccctcaccaggctccg
ggtaacaacagcaggcgagctagtgacccagttcgatcagtggcagatccacaagctctc
ccgaaacgctttaatagccttaacaatgttgcaatgatgggccgaaggaatgctctgcaa
caccgctctgactccagtctcgcccgccacatgtactcccctcggccacctagcattaca
gaaaatgtaatgatggaggctatgggtatggagccccaccttgctcctgttgatgccagg
gatcgttccttgatgatgccccctggagagagaagcttcatgggataccagcaacagcat
caaactcttggaggagccggaggtggaggtcctctttcaaatcaactgtccccaagccat
gactcgctgagctgccctgaccaggcttacatgcagggacactaccagaaccagggaggg
gaagtcccttccagagctggtggaaattcaataggtcaagtaaggcccattcactcagag
ggcatgtctaatacacttctgcagcaggctgagtacagtatgagcacctgccagctcagt
ccctcaggccctcattaccctggcattggccaggggggtgatgctggaggcacttggagt
gatacccacaaccaaatccaatcttccagccatgctctccagaaccagcgaggaatgccg
tattcggatgccaccctgcagcctcaacagacaccaacccacttcaacaatcagcaagcc
ctctacaacagtcccgatggaacccacaaactcatcatcaagcctgagcagcagttccat
ccggggatgggaggtggagatgcctgtcaaagtgctaaactccaacagcagcggatgctc
ctccagcagactcagggttacccgcaacagacaggccaggtcatgatgaggaattcaaac
aaccccagctgtgactttcaggggcagaaccagaactccttccccagtggcgggggcttg
agcttgggctgtgctggaacttcactagcagaagggcagaggtcagaaacccccatgatg
caggtgaaggagatgatggtgaggaactatgtgcagtcccaacaagcactcatgtgggag
cagcaacaagaacagcaacagcagagtggaataaaacctccccctctgtctgataacatg
gatatgagtgcccagacagcaatgatgcagcacagtccacaacaccaaaaccagaatctt
tactctagccaaacctatccatcctaccccaaccagaacctggtcatgagccctccgtcc
cacagctctgtgacaccgaaagaccagcagctccaaggctcatgttatggccaggagatg
gtggtccccaggcctcctcagggacggaaacccctcagccgtcagaacagcctgtcacag
gtaggaggagtctacttgggcagcccaccccacctcagccctgtccactctactaccagc
cccaggcgagcagtccgacttcctccagttcagcatccacagcacccgcaaaatgaaatg
ttctctccttcgaataacaacaacatgtactactcgggtcagataaacatgggtatggag
aaacacactgacccccaaaacggaccttgtctcaaccagcagcacagtatggggtccaac
ctggacccaacagttggcacaaagtctgcaccctatcctcagtctggtcctatctcaaat
gccttagaaaatcttgacctggacaatgctcgcatagacttcacctccatcattgatgat
gctgagccttcctccttcagtccagtcaacaatccccttcagggccaaccagggtcttcc
tcccaggcctcatcccgtctcaccaccccccagacttctgtcagcctcgctgcaggctct
ggcctgtccaacatggctgtgggcgacatgacgtctatgcttacctcgctggctggggag
aataaatacctgaacacactgtcttaa
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integrated database retrieval system
