Acanthopagrus latus (yellowfin seabream): 119021755
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Entry
119021755 CDS
T08233
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119021755 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119021755 (vps54)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119021755 (vps54)
Membrane trafficking [BR:
alat04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
119021755 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
119021755
NCBI-ProteinID:
XP_036958176
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All DBs
Position
1:1610717..1638660
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AA seq
980 aa
AA seq
DB search
MASSHRSSPAPRGGRDGIYPKERDPSPHRCRPIRSLPDVCPKEPTGEGRGLCPSVVAEHD
RWTVYSSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFYLPNITREHFGPYLQ
EMAQRERIHERCKTICPNKDDVDAVSSITTNHDKSRAELEQVPKIFMKPEFALEDPATFN
TVLPWSHFNSAGGKSSRDVASSKLLQEKLSHYLDVVEVSIARQISLRSEAFFHAMSSQHE
LQDRLQETQRAVAVLRGRTAAIDRVMCQGPLKALRTALTRNNCVKLHNKLKLMAAVHQTQ
PTVQLLLSTSEFVGALELISTTKEVLQQELQGIHSFRHLGSQLCELEKLIDKMMVEDFSM
YARSDLSRSLQEEPQVLEKVHTPNAASQKERLECLVFGLLRQRKLDFLDIYSDEMILAAK
AIVTQCVAESVLHIEEIDTEVVTKLADQMRVMTFPQWFELLKNVFESFLLYLQRIKGTLC
VIKNVVLEVLASNQKIRLLEEAGSGAAGQEDSPGPSALQGEAELAYLTHEGLFISDALND
AQQNQQTGVQDQSSVTGSRIQAAGCDSASGPTETSVSREQNFMSGENMMPTDLELNRVIN
NIQELLYSASDVSHDRCVKVLTARAKDGSLERLSSAEFVCLSQAVEAFVRDTEELCGRRS
VSLRGALQSQANRFVHRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVNSIADGRITLPE
RKIPGPEDRKPTEFLLVNGQKYAVVGTVLLLIRIFLEYCQCVNDIPSIATDMLTRLSDLL
KHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLVVHYIPVIRAHFETKLQPKQF
SVLRHFDHITKDYNDHIAEISAKLVAIMDSLFEKVLSKYEVKAPMPSACFRNVCKQMAKM
HEAISDLLPEEQTQMLFLRINASFKLHLKRQLARLGVVNDGGPQQGLVVVDVAFYTENMA
ALKSLERLDLNMVEIWEQKR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagccacaggtcgtccccagcgcctcgcggaggccgagatgggatctatcca
aaggagcgggatccttccccccatcgatgccggcccatccggtccctgcctgacgtctgt
cccaaggagccgacaggtgaggggcgtggcctgtgcccgtccgtggtggcggagcacgac
aggtggacggtgtacagctcgaaggtgaacctccccgccgcgctgaacgacccacggctc
gccaaacgggagtccgactttttcaccaaaacatgggggctggacttcgcagagacggag
gtgatgccgtccttctacctccccaacatcacccgggaacacttcgggccctacctgcag
gagatggctcagagggaaagaatccacgagcgctgtaagacgatctgtcccaacaaagac
gacgtggacgccgtctcaagtatcaccaccaaccacgataaatccagagctgagctggaa
caagtcccgaagatcttcatgaagcctgagtttgctctggaggacccggcgaccttcaac
accgtcctgccctggtcgcacttcaacagcgccggagggaagagcagcagagacgtggcg
tcctccaagctgctgcaggagaagctgagtcactacctggacgtggtggaggtgagcatc
gcccggcagatctctcttcgctccgaggcgtttttccacgccatgtcgtcgcagcacgag
ctgcaggaccggctgcaggagacgcagcgggccgtggccgtcctgcggggccggaccgcc
gccatcgaccgggtcatgtgccaggggccgctgaaggccctccggaccgccctcacccgc
aacaactgcgtgaagctgcacaacaagctgaagctgatggcggcggtgcatcagacgcag
cccaccgtgcagctgctgctctccacctccgagttcgtcggagcgctggagctcatctcc
accaccaaggaggtgctgcagcaggagctgcaggggatccacagcttcagacatctgggc
tctcagctgtgtgagctggagaagctgatcgataagatgatggtggaggatttcagcatg
tacgcccgcagcgacctgagccgcagcctgcaggaggagccgcaggtcctggagaaggtc
cacacaccgaacgctgcctcacagaaggagcgtctggagtgtttggtgttcggcctgctg
cgtcagaggaaactggacttcctggatatttacagcgatgagatgattttggctgccaaa
gccatcgtcactcagtgtgtagcagaaagtgttttgcacatagaagaaattgacactgaa
gtcgtcactaagctagctgaccagatgcgcgtgatgacgtttcctcagtggtttgagctg
ctgaagaacgtcttcgagagtttccttctctacctgcagaggatcaagggcactctgtgc
gtgatcaaaaacgtggttctggaggttctggcctccaaccagaagatccggctcctggag
gaggcgggttcaggcgctgctggtcaggaggactcccccggcccgtcagccttgcagggg
gaggccgagctggcctacctcacccacgaggggctgttcatcagcgacgctctgaacgat
gcccagcagaaccagcagacgggggtccaggaccagagctctgtgacgggctccaggatc
caggctgccggctgcgactctgcgtctgggcccacagagacgtcggtcagcagagagcag
aacttcatgtccggtgagaacatgatgcccactgatctggagctgaaccgcgtcatcaac
aacatccaggagctgctgtactcggcctccgacgtcagtcacgaccgctgcgtcaaagtc
ctcacggccagagccaaggacggctctctggagcgtctgagctcggccgagttcgtgtgt
ctctctcaggcggtggaggcgttcgtcagggacacggaggagctgtgtggccggcgcagc
gtctccctgcggggggcgctgcagagccaggccaaccgcttcgtccaccgcttccacgag
gagcgcaagaccaaactcagcctcctcctggataacgagcgctggaagcaggccgaggtt
cctgctgagtttcaggatctggtgaactccatcgctgacggcagaataacactaccagag
cgcaaaatcccaggtccggaggacaggaagcccacagagtttctgctcgtcaacgggcag
aaatacgccgttgttgggacggttctgctgctgatccggatctttctggagtactgtcag
tgtgtcaacgacatcccgtccatcgccaccgacatgctgacacgtctgtcggacctcctc
aagcacttcaactctcggagctgccagctggttctgggcgccggagctctgcaggttgtc
ggcctcaagaccatcaccaccaaaaacctagcattagcctcccgctgcctgcagctggtt
gttcactacattcccgtcatcagagctcattttgagaccaaactgcagcccaaacagttc
agcgtcctccgacacttcgaccacatcaccaaggactacaacgatcacatcgcagagatt
tctgctaagctggtggccatcatggacagtctgttcgagaaggttttatcaaagtatgag
gtgaaagctccgatgccgtcggcctgcttcaggaacgtctgtaagcagatggcgaagatg
cacgaagccatttctgatcttctacctgaagagcagacgcagatgttgttcctgaggatt
aatgccagttttaagctacacctgaagagacagctggctcgactcggggtcgttaatgat
ggaggaccccagcaggggctggtggtggtcgacgtcgccttctacactgagaacatggcg
gcgctgaagagcctcgagcggctcgacctgaacatggtggagatctgggagcagaagagg
tga
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