Acanthopagrus latus (yellowfin seabream): 119021794
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Entry
119021794 CDS
T08233
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119021794
Spliceosome [BR:
alat03041
]
Common components
Common spliceosomal components
General mRNP proteins
119021794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
119021794
NCBI-ProteinID:
XP_036958191
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Position
6:complement(182732..207486)
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AA seq
497 aa
AA seq
DB search
MADDLDIEAMLEAPYRKEDTKNLSPDGQEERSKRKRRSRSRDRKRSRSRDRKRSRSRERK
HSRSRDKRRSRSRERRSSRERGGRYRDHHKHRRRSKSKSPVRKEKSPIRLPIDNLTPEER
DARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGPMRLYVGSLHFNITEEMLRGIF
EPFGRIETIQLMMDSETGRSKGYGFITFADTECAKKALEQLNGFELAGRPMKVGHVTERT
DAFTASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPATQQALQMSGAIAIGAM
AAVSAAMNPALNMNMNSAALTLPSQPLATHCFQLANMFNPNSEEPPGWEVDIQHDVIEEC
NKHGGVVHIYVDKNSAEGNVYVKCPSIPAAMAAVNSLHGRYFAGKMITAAYVPLPTYHNL
FPESAIATQLLAPPPRR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacctggacatcgaggcgatgctggaggctccgtacaggaaggaggacacc
aagaacctgagcccggatggacaggaggaacgctccaagaggaagaggcgcagccgcagt
cgtgacagaaagcgcagccggagtcgagacaggaagaggagccggagtcgagagcgcaaa
cacagccgcagcagagacaaacgaagaagtcgcagcagagagcgacgcagcagcagagag
aggggggggcgctacagggaccaccacaagcaccgtcggcggtccaagagtaagagtcca
gtcaggaaagagaagagtccaatcagactgccgatagacaacctgactccggaggagcgt
gacgctcgcaccgtgttctgtatgcagttggcggccaggattcgacctcgagaccttgag
gagttcttctctgctgtggggaaggtccgcgatgtgaggatgatctctgacaggaactca
cgcagatcgaagggcatcgcctacatcgagtttgtggaggctaattcagttcctctggcc
attggactgacgggacaaaggctgctaggagttcctatcatcgtacaggcttcacaggct
gagaagaaccgagcagcagcagcagccaacaacctgcagaagggctcatcaggaccaatg
agactctacgtgggctccctgcacttcaacatcactgaggagatgctgagaggaatcttt
gagccgttcggacggattgagaccatccagctgatgatggacagcgagactggacgttct
aaaggctacggcttcatcacttttgctgatacagaatgtgcaaagaaagctctggagcag
ctgaatggcttcgagttggcgggtcgacccatgaaggttggtcatgtgactgagaggacc
gacgccttcacagcttcatctttcctcgacagtgacgagcttgaacggaccggcatcgac
ctcggaaccacaggacgactgcagctgatggcccgactggctgaaggtacaggtctacag
attcctcctgcaactcagcaggctctgcagatgagtggagcgatcgctataggagccatg
gctgctgtgtcagcggccatgaatccagctctcaacatgaacatgaactctgcagctctg
actcttccgtctcagccactcgccacacactgcttccagctagccaacatgttcaacccc
aacagtgaggagcctcctggttgggaggtggacatccagcatgacgtcatagaggagtgt
aacaaacatggaggagtcgttcacatctacgtggacaagaactctgctgagggaaacgtc
tacgtgaagtgtccgtcaatccccgctgccatggctgccgtcaactctctacatggaaga
tactttgctggtaagatgatcacagcagcatatgtccctctgcccacctaccacaaccta
ttcccagaatccgcaatcgccacacagctgctggccccacccccacgacgatga
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