Acanthopagrus latus (yellowfin seabream): 119021795
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Entry
119021795 CDS
T08233
Symbol
tsen2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2 isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alat03016
]
119021795 (tsen2)
Enzymes [BR:
alat01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
119021795 (tsen2)
Transfer RNA biogenesis [BR:
alat03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
119021795 (tsen2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
119021795
NCBI-ProteinID:
XP_036958194
LinkDB
All DBs
Position
6:complement(207647..216596)
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AA seq
416 aa
AA seq
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MQAEFRAPRRRARVQEEYDAPLPVSRDPEERSNYRAQLINQHVLVCHPDHIQKIHNQGYF
GKGILSRARPDHSISDQWEQHAGLFLPVISQSRYEELLRWAGSALSAQGLDEEAVSQMMV
RLSQPVEMEEVRRGGGGVEGEEKEGPGQEGGVCCSEVEQEAKRSCRLDMNPECDPDPSSD
QDSDSDSDSDSDSDPDPVAPGPGFVLVVSDNECVSACVRACVCLCLQVCVGLREVRRSPL
ALTEYLQLSLEEAFFLVYSLGCLSVYLHQEPLSIIHLWRKFRSLRPDFVSSFAAYQHCRS
RGWVPKEGGGAKYGVDFMLYRKGPPFYHASYSVVVERVDGAFTGSGLRRFSWRSLAALSR
ITSNVSKELMMCYIIYPADLSEAELDSPVCLGRLKVQEVIVSRWVSSRERAEQDDI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggagtttcgggctccacggagacgcgcacgggttcaggaggagtacgacgct
ccgctgccggtgagccgagacccggaagagaggagcaactatagggcgcagctcatcaac
caacacgtgctggtctgccacccggaccacatccagaagatccataaccagggttacttc
ggtaaaggcatcctgtccagagccagaccagaccacagcatttctgaccaatgggagcaa
catgcaggtctgtttctacctgtcatctcacagtccagatatgaggagctgctcaggtgg
gcgggttcagctctctctgctcagggattggatgaagaggctgtcagtcagatgatggtc
agactgtctcagccagtagagatggaggaagtgaggagaggaggaggaggggtggagggg
gaggagaaggaggggccgggacaagagggcggagtctgttgttcagaggtggagcaggag
gccaagaggagctgcaggttggacatgaaccctgaatgcgacccagatcccagctcagac
caagactctgactctgactctgactctgactctgactcagatcctgatcctgtggctcca
ggtcctggttttgtcctggtggtctcagacaatgagtgtgtgagtgcgtgcgtgcgtgcg
tgtgtgtgtttgtgtctgcaggtgtgtgtggggctcagggaggtccggcggtctccgctc
gctctcacagagtatctgcagctcagtctggaggaggccttctttctggtttacagtctg
ggctgcctgtctgtctacctgcaccaggagcccctatcaatcatccatctgtggaggaag
ttccggtcactgcggcctgactttgtcagctcatttgcagcctatcagcattgtcggagc
agggggtgggtccctaaagaggggggcggggccaagtacggcgttgacttcatgttgtac
aggaaaggaccgcctttctaccacgccagttactcggtggttgttgaacgtgtcgacggt
gcgttcacgggctcagggttgcgtcggttttcctggcgctctctggcggctctcagtagg
atcacctccaatgtttccaaggagctcatgatgtgttacatcatttatcctgccgaccta
tcagaggctgagctcgactcacctgtctgcctgggcaggctgaaggttcaggaagttatt
gtcagcaggtgggtttcctccagagagcgagccgagcaggacgacatctga
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integrated database retrieval system
