Acanthopagrus latus (yellowfin seabream): 119022398
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Entry
119022398 CDS
T08233
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
alat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119022398 (ube4b)
04120 Ubiquitin mediated proteolysis
119022398 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119022398 (ube4b)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119022398 (ube4b)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
U-box type E3
119022398 (ube4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
119022398
NCBI-ProteinID:
XP_036959096
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All DBs
Position
7:17632483..17651783
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AA seq
1184 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGAGPQPLPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAAEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATS
QPIAAAKSPDHRLTLVQPSSQGGSPMGPSAGSFGASSLSSLGACGGGLSCDSASDRFTIE
TCKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCISNVALVLQGTLTQP
RSPLQPSLLVPYMLCRNLPYGFIQELVRITHQEDEVFKQIFIPILHGLALAVKECSFDSD
NFKFPLMALAELCEIKFGKSHPVCSLATSLPLWCPKPLSPGCGREIQRLSYLGAFFSLSV
FAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKVLHNILLNGETRESALN
YMAALVNYNVKKAQMQTDDKLVSADGFMLNFLWVLQQLSMKIKLETVDPYYIFHPRCRLA
VSLEETRLKATMEELKSWLTELHEDPNKFSEPKFPTECFFLTLHTHHLSILPSCRRYIRR
LRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAKACADVGLLDENL
LRRCLQFYSTVIQLILRLVDPAYPNITLPLNPEIPKSFAALPEFYIEDVAEFLLFVVQYS
PQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQRFSEMMENH
PLSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNLAHHGTFMEEFNS
GKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLPREQQQSRQSQLTQD
ERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVE
NPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSSI
AIEKFKLLLEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPSGNIMDRSIIL
RHLLNSPTDPFNRQPLTESMLESVPELKERIHAWMREKQGGRPV
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagatgagattcgcagaaggcgactggcacgacttgcaggtgga
cagacatcacagcccagcacccccctcagcacacccctgacatccccacagagagagact
ccccctgggccgctcccaggaccctcaggtgccggaccccagcccctgccaccagctgcc
tctcaatcattggggctcaatgtccacagtggtacacctgccacatcccctatgggaacc
tctggggtggcatatggaagtcagagcagtgagggtgtgagctccctgtccagctctccc
tccaacagccttgagactcagtcccagagtttgtcccgatcgcagagcatggacattgac
actgcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggaggacagcgatcgcagggagaagaggaacttgaccgaaaaggaaacctctgca
aactcagatgtctcagaagaacaggctctgcagcttatttgtaagatcctccgcgtatcg
tggaaggagcaggatagagatgtcatctttctcccttcactggctgcagagtttcaccag
aaccctaaagatgtgtactctgacttcaaagacctgattggtcagatcctgatggaagtc
ttaatgatgtccacccagtcacgtgtccacaaccccttcgccagcttaaccgccacctct
cagccaattgcagcagccaaatcccccgaccaccgtctgacattggtgcagccctccagt
caaggtggcagtcccatgggccccagtgcagggtcctttggagccagctctctgtccagt
cttggtgcatgtggaggggggttgtcctgcgattcagccagcgaccgtttcaccattgaa
acatgcaaagagacagagatgctgaactacctcattgagcgtttcgacagtgttggcatg
gaggagaggaaagctcccaagatgtgtagccaaccaaatgtcagccagcttctcagcaac
attcgctctcagtgtatttccaacgttgccctggtcctgcaaggcaccctgacccagcct
cggagccctctccagccgtctttgctggtaccttacatgctgtgtcggaaccttccgtat
ggctttattcaggagcttgtgcgcataacccatcaggaggacgaggtgttcaaacagatc
ttcattccgatcctccatggactggctcttgcagtgaaagaatgttccttcgacagcgac
aactttaaattccccctcatggcattagctgagctttgtgaaatcaagtttggaaagagt
cacccagtctgcagtttggcgacatcactgccgctatggtgtcccaaacctctgagccct
ggttgtgggagagagatccagagactgtcctacctgggagccttcttcagcctctctgta
tttgctgaagatgataccaaagtaggagacaagtatttctctggcccagccatcaccatg
gagaacacgcgggttgtcagccaatcattgcagcactacctggagtcagcaaggggtgac
cttttcaaagttctccataacatcttactaaatggagaaacacgcgaatcagctcttaat
tacatggcagctctagtcaactacaatgtgaagaaagcccagatgcagactgatgacaag
ctagtgtctgcagacggcttcatgctgaacttcttatgggtgctgcaacagctgagcatg
aagataaagctggagacggtcgacccctactacattttccatccacgatgtcgccttgct
gtcagcctggaggaaacgcgtctgaaagccaccatggaggagctcaagagctggctcact
gaactgcatgaagatcccaacaagttctcagaacccaagttccccaccgagtgtttcttc
ctgacgctgcacacccaccatttgtctatcctgcctagctgcaggcgctacatccgcagg
ttgcgagccattcgtgaactgaacaggactgtagaggagctgaagaacagtgaaagccaa
tggaaagattctcccctggcaagtcgacacagagagatgctcaaacgatgcaaaacccag
ctcaagaaactggtgcgagccaaagcttgtgctgacgtgggccttctggacgagaacctg
ctccgcagatgcctgcagttctacagcacagtaatccagctcattcttcgattggtagac
cctgcctacccaaacatcaccctgccactgaaccctgagattcccaaaagctttgctgct
ctgcctgagttctacattgaggatgtggctgagtttctgctttttgttgtgcagtattct
ccccaggttttatacgagccgtgtgtccaggacatcgttaccttcttggtggtgttcatc
tgcagccagaactatatcaggaacccataccttatcgccaagttggtggaggtgctgttt
gtcaccaaccctgctgtgcagcctcgtactcagcgattctctgaaatgatggagaaccac
ccgctgtctgtcaagcagctggtccccgcccttatgaagttctacactgatgtcgagcat
acaggcgccaccagcgagttctacgataagttcactatacggtaccatatcagcactatc
ttcaagagtctctggcagaaccttgcccaccatggcaccttcatggaggagttcaactct
ggcaagcagtttgtgcgctacatcaacatgctgattaatgacaccaccttcttgttagac
gagagcctcgagtccctgaagcgtatccatgaggttcaagaggagatgaagaataaggag
cagtgggagcagctgcctagggaacagcagcagagccgccagtcccagctgactcaggat
gagcgggtgtctcgctcttatttggccctggccacagagacggttgaaatgttccacata
ctcacaaagcaggtccagaagcctttcctcaggcctgagctggggcctcgtttagccgcc
atgctgaactttaacctccagcagctctgtgggcctaaatgtcgtgacctgaaggtggag
aaccctgagaagtatggttttgagcccaagaagctcttagaccagctgactgacatctac
ctgcagctagactgtgcccgctttgctaaagcaattgcagatgaccagcggtcatacagc
cgtgagctctttgaggaggtgatctcaaagatgaggaaagctggtatcaagtcctccatc
gccattgaaaaattcaagctgctattggaaaaggtggaggaaatagtcgccaagaactcc
cagtctgagatggactacagcgacgcacctgacgagttcaaagaccctctgatggacaca
ctcatgaccgaccccgtgattctgccctcggggaacatcatggatcgatccatcatcctg
cggcatctgctcaactcccccactgaccccttcaacaggcagccgctcacagagagcatg
ctggaatcagtccctgaactgaaggagaggatccacgcctggatgagagaaaaacagggc
ggacggcctgtctaa
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integrated database retrieval system
