Acanthopagrus latus (yellowfin seabream): 119022521
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Entry
119022521 CDS
T08233
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119022521 (calcoco1a)
04131 Membrane trafficking [BR:
alat04131
]
119022521 (calcoco1a)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
119022521 (calcoco1a)
Membrane trafficking [BR:
alat04131
]
Autophagy
ER-phagy
ER-phagy recepters
119022521 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
CEP15-like
Motif
Other DBs
NCBI-GeneID:
119022521
NCBI-ProteinID:
XP_036959378
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All DBs
Position
7:14841927..14856473
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AA seq
653 aa
AA seq
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MEKAWLVEFRNVGCSYFPQSRVDCHYTLSSQHNWASNDWIGLFKVEWSSVKDYHTFVWAL
APADYQEGTDVNCCVHFQASYLPKPSSQEYEFVYIDAKGEVCSRSSKFTFCAPKPLEDLV
TLEEASQGEGEGTDMLLVVPRAELLQSRLEECLRERAELLQVQEAANRQRVKEKVEYRRA
REACDRRCRELESDIAGLQEELKQSQEKMEEMERKQKEVQALGESLAQEKSTLLDAREES
EARIKELEEDIKILTQRTVERETELERMKERAKRAGAQRKEEESERKSIQSKLEQSEGEL
RSLSKEFQGLRNSLAQRDTSVLQLQSTITTLTQKLTTAHRKEAESEATLKEMRSLRERLN
ASERAAEGLKSDLSATIAQRDHGQAELHQARLQAAQLTLQLADSSLALREGRARWTQERQ
SLQRAAEKDHERLEKLSTEMQRMEDRLQEERMERVKLEVELGREKDCNRVQLCETRRELQ
ELKASLRVAQKEKEQLLAEKQELMEYICQLEQKMGTVASAKWSAAPIASTGRPGSALSDS
EDENPEALQPLRPPRPLGHYSLCEQGEPDSLLLATPPSSPREAERSAVVINQPAPLSSPH
QAGSDTLAHSSDSEEEESNPLPCARHSSGEETALLLPEHTDTVLSDLADTSLW
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcttggctggtggagttcagaaacgtgggctgcagttacttccctcagagc
agagtcgattgccactacacactgagctcacagcacaactgggccagcaatgactggata
gggctcttcaaggtggaatggtcatcagtgaaggactaccacacgtttgtttgggcactg
gccccagctgactatcaggagggcaccgatgtcaactgctgcgtgcacttccaggcttcc
tacctacccaagcccagctcccaagagtatgagtttgtatatattgatgcgaagggggaa
gtttgctcccgtagctccaaattcactttctgcgctccaaagccacttgaggatttggtg
accctggaggaggcgtcccaaggagagggagaaggcacagacatgttgctggtggtgccc
agggctgagctgctgcagagtcggctggaggaatgcctgcgagagcgcgctgagctgctg
caggtgcaggaggcagcaaacaggcagagggtgaaagagaaggtggagtacaggagggca
agggaggcctgtgacagacgatgcagagagctagaaagcgacattgccgggctgcaggag
gagctgaagcagagtcaagagaaaatggaggagatggaaaggaagcagaaggaggtgcag
gctttaggagaatcactagcccaggagaaaagcactttattggatgcgagggaggagagc
gaagcgcgaatcaaagagctggaggaggatatcaaaatcctgacacagagaactgtcgaa
agagagacagagttggaaaggatgaaggaaagagcaaagagggctggagctcagaggaaa
gaagaggagagtgaaagaaagagcatacagagcaagctggaacagtcagagggtgaactc
cgaagtctgtctaaggagttccagggcctgaggaactcactggcccagagagacacaagt
gtcctgcagctccagagcaccatcactaccctcacccagaaactcaccactgcccacagg
aaagaggcggagagcgaggcaacgctgaaggagatgcggagcctgcgagagcgtctgaac
gcgagtgagcgtgctgcagagggcttgaaaagtgatctgagtgccacgatagcgcagagg
gatcatggacaggccgaactgcaccaggctcgtctgcaggcagcccagttgactcttcag
cttgcagattccagtctggccctgagggaaggaagagctcgctggactcaggagaggcag
agtctgcagcgcgctgccgagaaggaccatgagcgtctggagaaactcagcacagagatg
cagaggatggaggacaggctgcaggaggagaggatggaaagagtgaagctggaggttgag
cttgggagagaaaaggattgcaaccgggttcagctgtgtgaaacgcgcagggagctccag
gagctgaaggccagcctgagggtcgcccagaaggagaaggagcagctgcttgcagagaaa
caggagttgatggagtacatctgtcagctggagcagaagatgggaacagtggccagtgcc
aagtggagcgctgccccgattgcctccacagggcggcctggcagtgcattatctgactcc
gaggacgagaacccagaggctctgcagcccctccgtccaccaagacctctgggacactac
agcctgtgtgagcagggcgagcctgactccctgcttctcgccacccctccttcctccccc
agggaggcagagaggagcgccgtggtcatcaaccagccagccccgctctcctcaccacac
caggccggatccgacactctggcacacagctcggattcggaggaggaggaatctaatccg
cttccatgtgcaaggcacagctctggagaggaaacagcacttctgcttcctgagcacacg
gacactgttctcagtgatctggctgacacctcgctatggtaa
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