Acanthopagrus latus (yellowfin seabream): 119022727
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Entry
119022727 CDS
T08233
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119022727 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119022727 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
119022727 (fgd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
PH_11
RHG20_PH
zf-RING_UBOX
zf-RING_5
C1_1
Motif
Other DBs
NCBI-GeneID:
119022727
NCBI-ProteinID:
XP_036959834
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Position
7:238352..258881
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AA seq
1055 aa
AA seq
DB search
MQLNRPHSALLRFSFPPPPPPPPPSFSSQFSTMRFSYHLSSTSTPTAHSSTHRTGPSPSS
SPSLLTKSLSLEPSCSPCSHQGALDADAPQQMSSDPGPSSSSGPASLEGGPELTARCGSA
NGLLLVNDTGPPELPATTVTTQSKSRPPLPGPKPQVPPKPPHLQQQAGVLRPRPRVPDKA
LPPPPPCRPLPADPRGARTPPIHDDGTASPTCVLTLIEKFEREQIIVVPDITGGALCPRL
PEPASNSSRPSSPPSSSSSSFAPPPPDDELPSELKAHDDITQGNEGEEGASDLPDEDDDD
DDDEELVAVCRDDIHQKRLSMESGYSASEKHLEDDVVAVEMREQQQQQPQQLDQSELPSE
RLSLPSSQTDGKLANRDSGIDSISSPSHSEELCFAGVDDGGVVYSCSPALLPRLSSSSSY
AGDGGEGEARGGARRRRGFSEEGDSDLEEEEAELTLVLPPPKTDRQDSTELSVQQRVFNI
ANELLHTETAYVSKLHLLDQVFCARLLEEARSRSSFPCDVVQGIFSNICSIYCFHQQFLL
PALQKRMEEWDLNPRIGDILQKLAPFLKMYGEYVKNFDRAMELVNTWMERSAQFKTIVQE
IQREERCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDAPDYRDAQKSLELIATAAEH
SNAAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSNKNGTTQDRYLILFND
RLLYCVPKLRLIGQKYGVRARIDVDGMELKETSSAAVPRTFLVSGKQRSLELQARTEEEK
KDWIQAIQATIQRHEQTVESFRHLNCSLRDDESTPPHSPSCVELGKRAPTPIREKEVTLC
MKCQEPFNAITKRRHHCKACGHVVCGKCSEFRARLSYDNNRTNRVCVDCYAMLVGMSPSP
STLPSSAHRRRSILEKQASLAAENSVICSFLHHMEKGSGRGWQKAWFVIPENEPLVLYVY
GAPQDVKAQRSVPLIGFDVSLPESCDRLERRHAFKISQSHLTLFFSAEGEELQQRWMDVL
SRAGRGEEHQVHRPIVESVEEEGEELADAEEGENT
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaccgacctcacagcgccctgctcaggttcagcttcccacctccaccacca
cctcctcctccctccttctctagtcagttcagcaccatgaggttctcctaccacctgagc
tccacctccacacctacagcacacagcagcacccacaggacaggtccctccccctcctcc
agtcccagcttgctgactaagagtctctctctggagccgtcctgctcgccgtgcagccac
cagggggcactggacgccgatgcgccccagcagatgagctctgatccggggcccagctcc
tcctcaggccccgcctccctggagggagggccggagctaacagcacgctgcggctcagct
aacggactgctgctggtcaatgatacggggccaccggagctgccagctacaacagtaaca
acacagagcaagagcagaccgccactgcctggcccgaagcctcaggtccccccgaagccc
ccccacctccagcaacaggcgggggtgttaaggccacgcccccgagttccggacaaggcc
ctcccccctcctccaccctgtaggcccctcccagcagacccccgaggggcccggactccc
cccatacacgatgatggcacggcctcccccacctgcgtcctgacactgattgagaagttt
gagcgtgagcagatcatcgtggtccctgacatcactgggggggctctgtgtccccggctc
cctgaacccgcctccaactcctcccggccttcatcaccaccatcatcatcatcatcatca
tttgcccctccccctcctgatgatgagctaccctctgagctcaaagctcatgatgacatc
acacaggggaatgagggggaggagggtgccagtgacttgcctgatgaagatgatgatgac
gatgatgatgaagagctggtggcagtatgtcgtgacgacatccatcaaaagcgcctttct
atggagtcaggttacagcgcctcagagaaacacctggaggatgatgtggttgccgtagag
atgagggagcaacagcagcaacagccgcagcagctagaccaatcagagctcccctctgag
cgtctgtccctcccctcctcacagacggacgggaagctggccaatcgggacagtggcatc
gacagcatcagctctccgtcgcacagcgaggagctctgctttgctggtgtggatgacggg
ggtgtggtctactcctgcagccccgccctcctgccccgcctctccagctcgtcctcgtac
gcaggggacggaggagagggggaggcgaggggtggagccaggaggaggagggggttctct
gaggagggagacagcgacctggaggaagaagaggcagaacttacacttgtgctgcctccg
ccaaagactgatagacaggactccactgagctgtctgtccagcagagggtcttcaacatt
gccaatgagctgctgcacacagagactgcctacgtctccaagctccaccttctggaccag
gtgttctgtgctcgactcctggaggaggctcgctctcgctcgtccttcccctgtgacgtg
gtccaggggatcttctccaacatctgctccatctactgtttccaccagcagttccttctg
ccggccctgcagaaacgcatggaggagtgggacttgaacccgcggattggggacatcctt
cagaagctcgctccgttcctgaagatgtacggtgaatatgtgaagaactttgaccgggcc
atggagctggtgaacacctggatggagagatcagcccagttcaagaccatcgtccaggag
atccagagggaggagcgctgtgggaacttgactctgcagcatcacatgttggagcctgtt
cagaggattcctcgctacgagctgctgctcaaagattatctccaccgcctgccggaggac
gcgcccgactacagggacgcccagaagtctctggagctgatcgccacggcagcagaacac
tccaacgccgccatcaggaagatggagaggatgaggaagctgttgaaggtgtacgagttg
ttgggaggagaagaagacattgttaacccgacaaatgagctcattaaagaaggacacatc
ctcaaactgtccaacaagaacgggaccacacaggacagatacctcatactgtttaacgac
cggctgctgtactgtgtcccaaagctgcgtctgattggtcagaaatacggcgtacgtgct
cgcattgatgtggatggaatggagctgaaagaaacaagcagtgctgctgtccccagaacc
ttcctggtgtcaggaaaacagagatcactggagctacaggccaggacagaggaggagaag
aaagactggattcaggccatccaagccaccattcagagacacgagcagacagtggagagc
ttcagacacctgaactgttctctgcgagacgatgagtccacgccgcctcactctccgagc
tgtgtggagctgggaaagagagctccgactccgatcagagagaaggaagtcactctgtgt
atgaagtgtcaggagccgttcaacgccatcaccaagagacgacaccactgtaaagcctgc
ggacacgtggtttgtgggaaatgttctgagtttcgcgctcgtctgtcgtatgacaacaac
cgaaccaaccgagtgtgtgtcgactgctacgccatgctggtgggcatgtctccgtcacct
agtacactacccagcagcgcccacaggaggcgctccatcctggagaaacaggcgtccctg
gcagcagagaacagtgtgatttgtagttttcttcaccacatggagaaaggaagtgggcgg
ggctggcagaaggcgtggttcgtcatcccggagaacgagcctctggtgctctacgtgtac
ggagctccgcaggacgtgaaggcgcagcgcagcgtgcctctgattggcttcgacgtctcc
cttcctgagtcatgtgaccgcctggagcgacgccacgccttcaagatctcccagagtcac
ctgaccctgttcttcagtgctgagggggaggagctacagcagcgatggatggatgtcctg
tccagggctgggaggggggaggagcatcaggtccaccggccaatcgtggagagtgtggag
gaggagggggaggagctagcagacgcagaagagggggagaacacgtga
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