KEGG   Acanthopagrus latus (yellowfin seabream): 119022894
Entry
119022894         CDS       T08233                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:alat00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:alat01009]
    119022894 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:alat03036]
    119022894 (kdm5c)
Enzymes [BR:alat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     119022894 (kdm5c)
Protein phosphatases and associated proteins [BR:alat01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119022894 (kdm5c)
Chromosome and associated proteins [BR:alat03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119022894 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD DUF3829_2nd
Other DBs
NCBI-GeneID: 119022894
NCBI-ProteinID: XP_036960213
LinkDB
Position
7:6774513..6792590
AA seq 1599 aa
MAVAGRAMEGEEFVPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPPDWQPP
FSVELDSFRFTPRIQRLNELEAETRVKLNYLDRIARFWEIQASSLKIPHIERRILDLFSL
SRVVTDEGGFEMVCKERRWARVAQRLGYPPGKNIGSLLRSHYERIVYPFEMFQSGASLPH
CKPKHYDGEDVDKEYKPHSIPLRQSVQPSKMSSYGRRANRCQPDGPEDLAPHPLTTGSQL
ISAPEPTEEDIEKNPELKKLQIYGAGPKMMGLGLVARDKGMRKKDELPQTLTIKENVSPA
PGDTSVKAEPLASQEKQSDGSTSSPQLPPPSVTVKTEPKKEEPEEKYGKENDDEEDESDK
PCTKMTMRLRRNINNPQCVDSFVCRMCGRGDDDEKLLLCDGCDDNYHTYCLLPPLTDPPK
GNWRCPKCVAEECKKPAEAFGFEQATREYSLQSFGEMADAFKADYFNMPVHMVPTELVER
EFWRLVSSIEEDVTVEYGADIHSKEFGSGFPMNNGKRKLTKEEEEYARSGWNLNVMPVLE
QSLLCHINGDISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAE
RLEEVMKKLTPELFEYQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHS
GFNQGYNFAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAASPEKLDLNLA
AATHREMFIIVQEERKLRKSLMERGITEAEREAFELLPDDERQCDKCKTTCFLSALACSN
CPEHLVCLYHTQDLCNCPTDKLYLRYRYTLDELLGMLHRLKVRSESFDYWANRVKEALEQ
EEGNKIGIEDLELLKAEAAEKKFPDNELLRKLNTVLKDIERCQRTSTELLSDSETSETKM
TLAELKSVVETMQNLPCVMTQLEEVQAVLQTVEDFQSQAQELVNDKNWRRDSPPPEQLQT
LLEQGAKLPVIVPECNLLQGLKEQGHWLAEVRRTLGTEGGERQEVTLEVLRNLMEAGCNV
PQSVSVETAMAELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNIQ
ALQGCLTRARAWVTDLEEIQNGEHYPCLDDLEGLVAIGRDLPVFMEELRQLELQVASAHS
WRDKASKTFLKKSSPHSLLEVLCPCAKRRERRDETEPLDEPLEDSDTNTLGLSAQDLRDP
AAIVMAFKEGEHQEKEALLRLQTLNMCKSGHNTASYKEDKENGRWDGAMETDTSSHSENS
LKENGNSNHTCTTPPQSVCVCAAQPRTPQLRCHLCKDWFHGGCVPFPSLLPSSGPPMNPL
CWWDWDSRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAINWQGRAK
EALETPELQRALERLQELKKTLRSEKEEDTEKGTEGSSVIVLSDSEGGEGEDGVIDLTEE
SPRKNAKQSNGTQAGCENGVGKKSNVTGVGSLLPLLPSLKGQVVELSPATRVQLEELQLE
GDLLEVSLDQTLLIHRVLQAASVPPRETLHTLIQIELEEQRRTGRGRAKDSKRKRKNHRG
GSGEGARERSLDASESKKTCPLSLSRSPHLPAQTSPEIL
NT seq 4800 nt   +upstreamnt  +downstreamnt
atggctgttgctggaagggcaatggaaggggaagagtttgtgcctcctccggagtgtcca
gtttttgagccatcatgggaggagttccaggatcccctgggctacatcgccaagatacgt
cctattgcagagaagtctggaatctgcaaaattcgacctccaccagactggcagcctccg
ttttcagtggagctggatagcttccgcttcacaccccgcatccagaggctcaatgagttg
gaggcggaaaccagagtgaagctgaattacctggaccgcatcgccaggttttgggagatc
caggcatcgtccttgaaaatcccacatattgaaagacgcatccttgatcttttcagcctg
tcaagggttgtgacagatgaaggaggttttgagatggtgtgtaaggaacgccgctgggct
cgtgttgcccagaggcttggttatcctccgggcaagaacatcggttctctgctgcgctcg
cactacgagaggattgtctacccctttgaaatgttccagtctggtgccagcctgccgcat
tgcaagccaaagcactatgatggcgaggatgtggataaagagtacaagccccactccatc
cccctgcgacagtctgtgcagccatccaaaatgagcagttatggacgcagggcaaaccgc
tgccaacctgatggtccagaggatctggccccccatcctctcaccactggctctcaactc
atctctgcgcctgaaccaacagaggaagatatagagaagaacccagaactgaagaagcta
caaatctatggcgctgggcctaagatgatgggacttggactggtggcgagagacaaaggc
atgcggaagaaagatgagctgcctcaaacgctgaccatcaaggagaacgtgtctcctgct
cctggtgatacctcagtcaaagcagagccactggcgtctcaggagaagcagagtgacggg
agcacatcgagcccccagctgcctccccccagcgtcactgtgaagacagaaccgaagaaa
gaagagccagaggaaaaatatgggaaagagaatgatgacgaggaagatgagtctgataaa
ccatgtacaaaaatgaccatgaggctgagacgcaacatcaacaacccacagtgtgtggat
tcttttgtgtgtcggatgtgtggtcgaggagatgatgacgagaaactcctgctgtgtgat
ggctgtgatgacaactaccacacctactgtctactccccccactcaccgatcctcccaaa
ggcaactggcgatgccccaagtgtgtggcagaggagtgcaagaaacctgcagaagcattt
ggcttcgaacaggctacacgagaatacagtttgcagagctttggggaaatggcagacgcc
ttcaaagccgattacttcaacatgcctgtccatatggttcccactgagcttgtggagaga
gaattctggaggttagtcagcagtatcgaggaagacgtgacagtagagtacggcgcggac
atacactccaaagagtttggcagcggcttcccgatgaacaatggaaagaggaagctcaca
aaggaagaggaggaatacgcccgcagtggctggaacttgaacgtgatgcccgtgctggag
cagtccctgctgtgtcacatcaatggagacatctctgggatgaaggtgccctggctttac
gtcggtatggtgttctcagctttctgctggcacattgaggatcactggagctactccatt
aactacctgcactggggtgaaccaaagacttggtacggggttccatctgtagcagctgag
cgtcttgaggaggtgatgaagaagctgacgccagagctgtttgagtatcaacccgacctc
ctgcaccagctggtcaccatcatgaaccccaatatcctcatgtctcatggtgtaccggtt
gtacgtaccaaccagtgtgccggagagttcgtcatcaccttcccccgagcctaccacagt
ggcttcaatcagggatataactttgctgaagctgttaacttctgcactgcagactggctg
cccgccggacgttcctgtattgagcattaccggcgtctgaggaggtattgtgttttctcc
catgaggagctcacctgcaaaatggctgccagcccagagaaactagacctcaatcttgct
gcagccacacaccgggaaatgttcattattgttcaggaagagcggaagctgcgcaaaagt
ctgatggagaggggcattactgaagcagagcgtgaggcatttgagctgctgcctgatgat
gagagacagtgcgataaatgtaagaccacatgcttcctttctgctctggcctgctcaaac
tgtcccgagcatctggtgtgtctctatcacactcaggatctttgcaactgccccactgac
aaactctacctcaggtacagatacaccctggatgagttgttaggcatgttacaccgatta
aaggttcggtctgagtcctttgattactgggccaacagagtaaaggaggcactcgaacag
gaagaaggaaacaagataggaattgaggacctggagttgctgaaggcagaagcagcagag
aaaaaatttccagacaacgaactccttcggaagctcaacactgttctgaaagacattgaa
cgctgccagcggaccagtactgaactcctcagcgactcagagaccagtgagactaagatg
actttggcagagctgaaatccgtagtagagacgatgcaaaacctgccctgtgtgatgacc
cagttggaggaagtgcaggcggttctgcagacagtggaggatttccagagccaggctcaa
gagctggtcaacgacaagaactggaggagggactccccaccacctgagcagctgcagact
ttgttggagcagggggccaaactgcctgttattgtgccagagtgtaatttactccagggc
ctaaaggagcaaggccactggctggcagaggtgaggcgcaccttaggcacagaaggaggg
gaaaggcaggaggtgacactggaggtgttaaggaacctgatggaagcaggctgcaacgtg
ccccaaagtgtgtctgtggagactgccatggctgagcttcaggagctgctcacgattgca
gaacgttgggaagagaaggcacagatctgcctcgaacagaggcaaaagcaccccctttct
accctggaggcaatagtaaatgaggcacagcttattccagtcaagctgcccaacattcag
gctctgcagggttgcctcactcgagcacgggcctgggtaaccgaccttgaggaaatccag
aatggggagcattacccctgtctggatgacctcgagggcctggtggctattgggagggac
ttgccggtcttcatggaggagctaagacagctggaactgcaggtagctagcgctcactcc
tggagggacaaggccagcaagactttcctgaagaaaagcagtccgcacagtctgttagag
gtattatgtccgtgtgcgaaaaggagagagaggcgagatgaaacggagccgttggatgag
ccactagaagactctgataccaacacactgggcctctctgctcaggacctgagggaccct
gcagctattgtgatggctttcaaagaaggggagcatcaggagaaggaggcactactgagg
ctacagacgttgaacatgtgtaagtctggacataacactgcaagttacaaggaggacaag
gagaacgggaggtgggacggtgccatggagacggacacatccagtcactcagagaactct
ctaaaagagaacggcaacagtaaccacacctgcaccacccctcctcagtcggtgtgtgtg
tgcgccgctcagccacggacccctcaactccgctgccatctgtgtaaggactggttccac
ggtggctgcgttcctttcccctccctgctcccctcctcgggaccacccatgaaccccctc
tgttggtgggactgggactcgcgcttcttgtgtccgcgatgccagcggtcacggcgccca
cgcctggagactatcctggcgttacttgttgccctgcagaggctgccggtgcgtctgcct
gaaggagaagcactgcagtgtctcacagagagggccatcaactggcagggccgagccaag
gaggcgctggagacgccggaactgcagcgggcgcttgagaggctgcaagaactcaaaaag
actctccgtagtgagaaagaggaagacacagaaaaggggacagaggggagctcggtgatt
gtgttatcggactccgagggaggggagggagaggatggagtcattgatctgacagaggaa
tcccccaggaagaacgccaagcaaagcaacggcactcaggctggatgtgaaaatggcgtc
ggcaagaagtctaatgttactggcgttgggtcactgctgcccctgctgccctctctaaaa
ggccaggtagtggagctctcaccagccaccagggtccaactggaggagctgcagctggag
ggagatctgctggaggtgtcgctggaccagacactcctcatccacagagtcctgcaagcc
gcctctgttccacccagagaaacactgcacacactcattcagattgagcttgaagagcag
aggcgaaccggccgcggacgagccaaggactccaaaaggaagaggaagaaccacagaggt
ggcagcggggaaggggcgagagaacggtcactggatgcctcagagtcaaagaaaacatgt
cccctcagcctcagccgctcccctcacttaccggcccagaccagtccagagattttgtga

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