Acanthopagrus latus (yellowfin seabream): 119023010
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Entry
119023010 CDS
T08233
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119023010 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119023010 (scn8aa)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119023010 (scn8aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
FraC
HpsJ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
119023010
NCBI-ProteinID:
XP_036960470
LinkDB
All DBs
Position
7:complement(16115413..16165216)
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AA seq
1967 aa
AA seq
DB search
MAAPLIAPPGPDSFKKFTLESLAILEQRINEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDPPKGMVAVPLEDLDPYYLNTQKTFIVLNKGKTIFRFSATPALYFISPFN
LVRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKICA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINITESHLANGSKG
FDWDEYIMNDTNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWA
FLALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATMEEALQKEEEFKAMLDQLKKQQEDAQAAAMATSAGTVSEDAVEDDGGGRLSCSSSEMS
KLSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIM
NQSLLSIPGSPFLSRHNSKSSIFSFKGRSKDVGSENEFADDEHSTVEECEERRGSLFSPY
RRSSYSGFHGKRNSTVDCNGVVSLIGPGPGGRLLPEVKIDKAATDDSPTTEVEVKKKLSG
SLMVSVDQLNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFSNTFLIWECSPT
WIKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAG
EMLFKLVAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWH
MNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLS
SFSADNLAATDDDGEPNNLQISVRRIKIGIAWVKAKVRILMASLLKKPPMEDEQKPLDDM
YDKKLNCIANHTGVDINRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVP
IAVGESDFENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVEEVVVVETVEEYMEP
EACWTDGCVAKYKCCDVPINAGWGKYWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAF
EDVYIEQRKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIV
SLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF
WLIFSIMGVNLFAGKYYYCFNETSEEYFPVDVVNNKTQCVALMEQNYTEVRWKNVKINFD
NVGAGYLALLQVATFKGWMDIMYAAVDSRNVEDQPDYEVNIYMYIYFVVFIIFGSFFTLN
LFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGMVFD
FVTQQVFDISIMILICLNMVTMMVETDDQSDETELVLYWVNFIFIVVFTTEFLLKLFALR
HYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGI
RTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMII
LFMITTSAGWDGLLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIV
VNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADTLEH
PLRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAAN
PSKVSYEPITTTLRRKQEDVSARIIQNAYRAHLIRRGIIFKRHTFTNNKLENGGTNQEKK
ESTPSTASLPSYDSVTKPDKEKQDENKEEWARKEKDKNQKDEWESKC
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttattgcaccgccaggacctgatagcttcaagaagtttactttggaa
tctttggcgattctcgagcagcgcatcaatgaggagaagaacaagaagccacccaagcag
gacagcagctaccgcgacgatgatgacgagaacaagcccaagcctaacagcgatctggag
gctgggaagagtctgccctacatctacggcgacccccctaaaggaatggtggcggtacca
ctggaggacctggacccatactacctgaacactcagaaaacatttatagtgctaaataaa
gggaagacaatcttccgttttagtgccacacctgccttgtacttcataagtccttttaat
ctcgttaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacctttagcgatcctcccgagtggtcaaaa
caagtagagtacacattcacaggaatttatacatttgagtctcttgtaaaaatctgcgca
cgaggattctgtatagacgggtttacattccttagagatccatggaactggctggatttc
atggtcatttcaatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacgttcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagacc
attgtgggcgccctgatccagtctgtgaagaagctttcggatgtgatgatcctgaccgtc
ttctgcctgagtgtctttgccctcatcggtctccagctcttcatgggcaacctgcgccac
aagtgtgtgatctggccaatcaacatcactgagagccacctggccaacggcagcaagggc
tttgactgggacgagtacatcatgaacgacaccaatttctacttcctgcccggccagctg
gatgcacttctctgcgggaacagctctgactctggccgctgcccggagggctacacatgt
atgaaagctgggaggaatccaaactacggctacaccagctttgacagcttcggctgggcc
ttcctggctctcttccgactcatgacacaggacttctgggaaaacctttacatgctgacc
ctgagagctgcagggaagacctacatgatcttctttgtgttggttatcttcgtgggttcc
ttctacctggtgaatctgatcttggctgtggtagccatggcctacgaggagcagaatcaa
gccaccatggaagaggccctgcagaaggaggaggaattcaaggccatgctggatcagctc
aagaaacagcaggaagatgctcaggctgctgcgatggcaacctctgctggcacggtgtca
gaggacgcggtggaggacgacggaggagggcgtctgtcgtgcagttcctccgagatgtca
aagctcagctccaagagcgccaaagagcggcgcaatcgcaagaagaaatggcggcagaaa
gagcaagagaaggaaaaaggagacagcgagaagtttgtcaagtcagagtcggatgacggc
agcaagaggagccgcttccggttcccagataatcgcctgggtcgaaagtcttccattatg
aaccagtccctcctcagcatacctggctcgcctttcctgtcccgccacaacagcaagagc
agcatcttcagcttcaaggggcgcagcaaagacgtgggctcggagaacgaattcgcggac
gacgagcacagcacagtggaggagtgtgaggagcgtcggggctccctgttcagcccgtat
cggcggagcagctacagcggcttccacggcaagaggaacagcacagtggattgcaacggc
gtggtgtcgctcatcggccctgggcccggtggacgccttctgcctgaggtgaaaatagat
aaggcagctactgacgacagtccgactactgaggttgaggtgaagaagaagctgtcgggc
tccctgatggtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggccaac
agtgtcatgagcgtcattaccaacacactagtggaggaactggaggagtctcagcgcaag
tgtccgccatgctggtataagttttctaacacattcctgatctgggagtgctcccccacc
tggattaagatcaaggaaattgtgaacctgattgtcatggatcccttcgtggacttagcc
atcaccatctgtattgtcctgaacaccctcttcatggccatggagcactaccccatgacc
cccgactttgaagacatgctgtctgtaggcaatctggtgttcactgggatcttcgcagga
gagatgcttttcaagctggtggctatggatccgtactactacttccaggaggcctggaac
tgttttgatggtttcattgtgacgctgagtttagtagagctggctctggcggacgtcgaa
ggcctgtctgtgttgcggtcattccgattgctgagagtgttcaagctggccaagtcatgg
ccgaccctcaacatgctgatcaagatcattggtaactcggtgggagccttggggaacttg
actctggtgctggccatcatcgtcttcatctttgccgtggtaggcatgcagctgtttggc
aagagctacaaagactgtgtgtgtaaaatcgctgctgactgtgagctgccacgctggcac
atgaacgacttcttccactccttcctgatcgttttccgggtgttgtgtggcgagtggatt
gaaaccatgtgggactgcatggaggtggcggggcagggcatgtgcctcattgtcttcatg
atggtcatggtcatcggcaacctggtggtgttgaacctgttccttgccttgctgctgagc
tcattcagtgctgacaatttagctgcgacagatgacgacggtgaacccaacaacctgcag
atttccgtcaggcgcatcaagatcggtattgcatgggtaaaagcaaaggtaaggatactg
atggccagtcttctgaagaaaccaccgatggaggacgagcaaaagcctttggatgacatg
tatgacaagaagctgaattgcattgctaaccacaccggggtggacatcaaccgtgacctg
gactatgccaagaatggtaacggcacaaccagcggtatcggcagcagcgtgggcaagtat
atgatcgatgaggaccacatgtcgttcatccacaatcccaacctgaccgtctgcgtgccc
atagctgtgggagagtctgactttgagaacctcaacacggaggacttcagcagcgagtcg
gagaatgagaacagcaaagagctggatgacaccagttcatcagagggaagcacaatcgac
atcaaaccagatgtggaagaggtggttgtggtggagacagtggaggaatacatggaaccg
gaggcgtgttggacagatggttgtgttgccaagtataagtgctgtgatgtccccatcaat
gcgggctgggggaagtactggtggttcctgagaaaaacctgctacctgattgtggaacac
aactggtttgagaccctcatcatcttcatgatcctcctcagcagcggtgccctggccttt
gaggatgtgtacatcgagcagagaaagaccatccggatcattttggagtacgccgacagg
gttttcacctacatctttatcctggagatgttgctgaaatgggtcgcctacggtttcgtc
aagtatttcaccaacgcctggtgttggctggacttcttcattgtggatgtgtctatagtc
agccttgtagctaatgcgctgggctactccgatctagggcccattaaatcactcaggaca
ctaagggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtc
aacgccttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttt
tggctgattttcagtatcatgggggtcaacttgtttgcgggcaagtactactactgtttc
aatgagacgtcagaggaatacttccccgtcgatgtggtcaacaacaagacccagtgcgtg
gccctcatggaacaaaactataccgaggtcaggtggaagaacgtcaagatcaactttgac
aatgtgggcgccggctacctggccctgctgcaagtggccacattcaaaggctggatggac
attatgtacgcagctgtggattcaagaaacgtggaagaccagcctgactatgaagtcaac
atctacatgtacatctactttgttgttttcatcatattcggctccttcttcacccttaac
ctctttattggtgtgatcatcgacaacttcaaccagcagaagaaaaagtttggaggtcag
gatatcttcatgacggaggaacagaagaaatactacaatgccatgaaaaaactggggtcc
aaaaagccacaaaaacctattcctcgaccacagaacaaggtccaaggcatggtgtttgac
tttgtgacgcaacaagtcttcgacatctccatcatgatactcatctgtctcaacatggtc
accatgatggttgaaacggacgatcagtcggatgaaacagagcttgtcctctactgggtc
aacttcatttttatcgtagtcttcactacagaattcttgctgaagctctttgcccttcgc
cactattacttcaccaacggctggaatatcttcgacgtggtggtggtgatcctgtctatt
gtcggcatgttcctggctgacctcattgagaagtactttgtgtcaccgactctgttcagg
gtgatcaggttggctcgtattggccgtatcctccgtctgatcaaaggagctaagggcatc
cggactttactctttgccctgatgatgtcactgccagcccttttcaacattgggctcctg
ctcttcctggtcatgttcatcttctccatcttcggtatgtccaacttcggctatgtcaaa
cacggagcaggcattgacgacttgtacaactttgagacctttggcaacagcatgatcatt
ctgttcatgatcaccacgtcggctggatgggacggcttactgctgccgatcctcaactac
ccaccagactgcgatcccaatttggaaaaccctggtacatccgtgaagggcgactgtggc
aacccctcagtgggaatcttcttctttgtcatgtatatcatcatttccttcctgattgtg
gtcaacatgtacatcgccatcattctggagaacttcagcgtggccacagaggaaagtgca
gatccactcagcgaggacgacttcgagaccttttacgagatctgggagaagtttgacccc
actgcctctcagttcatcacttttgccaagctgtctgactttgctgacacactggagcac
ccacttcgtgtgccaaagcccaacactatagaactaatagccatggacatgcccatggtg
agcggcgatcgcattcactgcctggacatcctgtttgccttcacaaagcgagtgctgggt
gacagtggtgagttggacatgctgaggcaacagatggaagagcgttttgtggcagccaac
ccctccaaggtgtcgtatgaacccatcaccaccactcttcgccgcaaacaggaggacgtc
tctgccagaattatccagaatgcctaccgcgcccacctcatcaggcgtggcatcatcttc
aagcgccacactttcactaacaacaagctggagaacggcgggaccaaccaagagaagaag
gagagcacaccatccacagcctctctcccctcgtacgacagcgtgaccaaacccgacaag
gagaagcaggatgaaaacaaggaggagtgggcccgaaaagagaaggacaaaaaccaaaaa
gatgagtgggaatccaagtgttag
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integrated database retrieval system
