Acanthopagrus latus (yellowfin seabream): 119023047
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Entry
119023047 CDS
T08233
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alat03400
]
119023047 (smc5)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
119023047 (smc5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
PigL_N
AAA_29
AAA_25
DUF7946
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
119023047
NCBI-ProteinID:
XP_036960562
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Position
7:16344213..16354172
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AA seq
1078 aa
AA seq
DB search
MATPGKKRRVSHATSSSQASSNSIANVLAGSQADGPGGEGRFVEGSIISITMKNFLTYDY
SVVYPGPNLNMIVGANGTGKSSIVCAICLGLAGKTAILGRGDKVGLYVKRGCHKGFIEIK
LYKTGGNLVINREIHVENNQSLWMLNGRHCNQKTVEEEVKALRIQVSNLCQFLPQEKVGE
FAKMSKIELLEATEKSVGPPEMYEYHCELKNFRNRERELENVVKEKASFLEKAKLRNERN
KHDVNRYYEKKRHLDVIELLEKKKPWVEYETTRKDLEDVKRERDEAKRQLSSLKQAQTPM
LRKIQQIDNQLKPTEAQIKAKTAAIKEASLKCKQKQDQLDRKHKEIEDIKQTLRLKQMEE
EDHQKRISNTRRTIEDLKAELAKVGDQPDVTPQINDVNVELRRIQEERAKLEGEKSDLRR
ERDNFSAESKMLEKKLNDMNNMMNAKEEKLRGRHRDTHAALQWLRQNRQLFGGNVHEPMM
LVINVKDHRFAKYVENHISFHDLRAFVFQKKDDMERFMTEVRDKMNLKVNSISAPEESCS
KKAPSRNIESLRRFGFFTYLREMFDAPDEVMSYLCQQYKVHDVPVGNEQTKAMIRTVIEE
PYIKVLYTTDERYTLKRSFYSNKISTSNSAVHPSQYLTITVDAEEKRHLEQQMKECVSKL
RDIDERMKALQKEIVALDRRDNELLAQKKRLSEQKGKKRQLEQKISTKQDSLRQMEQNAI
DLQKIEEDTKVKITAVNSQKVTIVAAFMAQMKLRAKLTMEKVYLALETVALTAEKTKLEN
DCKEGASELRTTDQKCTRLEQRKVQLHEQCKGLLKRAKTICRMQSDESLPEDLRNAFSKL
PDTLDEIDAMLNEERSRAECFTGLSENVVEEYNRREQEIKHLEKELEDKTNALNAYRQNI
SEAKERWLNPLKQLVEQINSKFSDFFRTMQCAGEVDLHSENEEEYDKYGIRIRVKFHSST
QLHELTPYHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTA
CKETTSQYFFITPKLLQNLQYADEMTVLCVHNGPYMLPPNQWDEKAFIRRCLQRKARA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcccggcaagaaacgacgagttagtcatgctaccagcagctcccaagcttcg
agtaacagcatcgcaaacgtgctggcaggtagtcaagccgatggacctggcggagagggt
cgtttcgtggagggctccataattagcatcaccatgaaaaacttcctgacttatgactac
tctgtggtgtaccctggacctaatttgaacatgattgttggagccaatggaactggcaag
tcaagcattgtgtgtgccatctgtctgggtctggctggcaagaccgctatccttggcaga
ggcgacaaggttgggctctatgtcaaacgcgggtgccataaaggatttattgagattaaa
ctgtacaagactggtggtaatttagtgattaacagagagatacatgtggagaacaatcag
tctctgtggatgctgaatggaagacactgcaaccagaaaacagtggaagaggaggtcaag
gctctgcgtatccaagtcagcaacctctgccagtttctgcctcaggagaaagtgggtgag
ttcgcgaagatgtccaaaattgagttgctcgaggcaactgagaagtcagtgggaccacca
gagatgtatgaataccactgtgagctcaaaaactttcgcaacagagaacgagaactggag
aacgtagtgaaggagaaggccagcttcctggagaaggccaagctgaggaatgagaggaac
aaacatgatgtgaaccgttactatgaaaagaagaggcatctggatgtgattgagttgctt
gagaagaagaaaccatgggtggagtacgagaccactcgcaaggaccttgaggacgtgaag
agagagcgagatgaggctaaaaggcagctctcttccctgaagcaggctcagacaccaatg
ctgaggaagatccagcagattgacaaccagctgaaacccactgaggcacaaataaaggca
aagactgctgccattaaagaagcctctttgaagtgcaaacagaaacaggatcagttggat
cgaaaacacaaagagattgaagatattaaacaaacactgagactgaagcagatggaagag
gaggaccaccagaagcgaatcagcaacaccagacggacaatcgaggacctgaaggcagag
cttgccaaagtcggcgaccaaccagatgtgacaccacagatcaatgatgttaacgtcgag
ctgaggcgcatccaggaggagagagccaagctggaaggagagaagtccgacctacgcagg
gagagggataacttctctgctgagtccaaaatgttggagaaaaagctcaatgacatgaac
aacatgatgaatgctaaagaggagaagctgcgaggacgtcacagggacacacatgctgcc
ctccagtggctcaggcagaacagacaactctttggtggaaatgtccacgagcccatgatg
ctggtgatcaatgtgaaagatcatcgctttgccaagtatgtagagaaccacatctccttc
cacgatctgcgggcgttcgtcttccagaaaaaagacgacatggagaggttcatgactgag
gtccgtgacaagatgaacttgaaggtgaattccatatcggctcctgaggaatcgtgttct
aagaaggcgccatccagaaatattgagtccctgaggcgttttgggttctttacctaccta
cgtgagatgtttgatgctccagatgaggtgatgagttacctctgtcagcagtacaaggtg
catgatgtccctgtgggcaacgaacaaactaaagccatgatcagaacggtgatcgaagag
ccctacatcaaagtgttgtacacaacagatgagagatacacattgaagaggtctttttac
tccaataagatcagcaccagtaactctgcagtgcacccttcccagtacctcaccattact
gtggacgccgaagagaaacggcatctggagcagcagatgaaggaatgtgtgtcaaagtta
cgagacattgatgaacggatgaaggccctgcagaaggaaattgtcgccttggatcgccgc
gataatgagctgttggcacagaagaagaggctttctgaacaaaagggcaaaaagagacaa
ctggagcagaaaatcagcaccaaacaggacagtctgaggcagatggagcagaatgctatt
gacctgcagaagattgaagaggacactaaagtgaagattacagctgtcaattctcagaag
gtgaccatcgtcgcagcgttcatggctcaaatgaagctgagggccaagctgactatggag
aaagtgtacctggctttggagacggtggcgttgacagcagagaagaccaaactggagaat
gactgtaaagaaggcgcctctgaactcaggaccactgatcaaaaatgcacccgtctggag
cagaggaaggtgcagctgcacgaacaatgcaagggccttttgaagagagcgaagacgatc
tgcaggatgcaatctgatgagtcactgcctgaagacctccgcaatgctttcagcaaactg
cctgacacgctggacgagattgatgccatgttgaatgaggagcggtcaagagctgagtgc
ttcactggcctcagtgaaaatgttgttgaggagtacaacaggagagagcaggagatcaaa
catctggagaaggaactggaagataaaaccaatgccctgaacgcctaccgacagaacata
tcagaggctaaggagcgttggctgaacccgctgaagcagctggtggagcagattaacagc
aagttcagtgacttcttccgtaccatgcagtgtgcaggagaagttgatctgcactcagag
aacgaggaggagtatgacaagtatgggatcagaatccgcgtcaagtttcacagcagcact
cagctccacgagctgacgccctaccatcagagcggaggagagcgcagcgtatccacaatg
ctctacctcatggccctgcaggagctcaaccgctgcccattcagagtggtggacgagatc
aaccagggaatggatcctgtaaatgagagaagagtgtttgacatagtagtccgcacggcc
tgcaaggagacaacgtcgcagtacttcttcataacaccaaaactgctgcaaaatcttcag
tacgctgacgagatgacagttctctgtgtccataatggcccttacatgcttccccccaac
caatgggatgagaaggcgttcatcagacggtgcctccagagaaaagccagggcatga
DBGET
integrated database retrieval system
