Acanthopagrus latus (yellowfin seabream): 119023191
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Entry
119023191 CDS
T08233
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119023191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119023191
03036 Chromosome and associated proteins [BR:
alat03036
]
119023191
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119023191
Coactivators
SAGA/TFTC/STAGA complex
119023191
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119023191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
119023191
NCBI-ProteinID:
XP_036960827
LinkDB
All DBs
Position
7:9833722..9848470
Genome browser
AA seq
970 aa
AA seq
DB search
MAAGSDLLDDVFFNTEVDEKVVSDLVGSLECELSGSGRVSAAVKVQSAANYVGNQAKGSN
SNVQGSKMGLSQQELAKAGTGVQGGVINSTGSHGSGMDGAVGTTSAAGQSVTAAQSQSKP
GIASGVVTVASDSTSGVVKPGTTAVQTLNGSTVVVNCHVPGGASADSSGHNSQPAVALVN
NGPVSVSKGSAAVLSSTASTIIRTSSTSVQNAVISAPSSVKSVPTVTLVRPPMQTLTITS
QSGDNPTAVLTSPAVSVSSTAAGSLVNKTIIQTGGHIVASTVATGTTATMRSPTVLQSLR
TSVPSTIAATPPGGIRAIAPQVLAPRLAQPQQNVQNIQLPPGMVLVRSESGQLLMIHQQT
LAQMQAQSQSQSAMTPRPAAPTSTPPVQITSLQAPGTSLLARPVTPTTIIKQGSTVQTSV
TATTTLQRPPVLQNTIMLGGTATTPGQPIATPATVQPGSAATAVTQRVGPLGATGTPVTP
TAITAETLENVKKCRNFLSTLIKLASGKQSSETTANVKELVKNLLEAKIEPEDFTSRLYQ
ELNSSPQPYLVPFLKRSLPALRQMTPDSEAFIQQSLLPQPSTPAAAAASTALTAVVLRPP
LSTAATTATSTAATKTTVISLTQTPHSKPGMIVPQQQGTIARPQVTLAQSPMVTLRGQSH
SRIIVGQPQVVKQLQTAVKQTLVPGAKGVQIVSQASLTAAQKNKLKEAGGGTFRDDDDIN
DVASMAGVNLSEESARILATNSELVGTVTRSCKDETFLSTSSLTRRALEIGKKFGISELG
TDVINYISHATQQRLQNLLEKVSQVAQQKNINLKEDARYEQVGDVRAQLKFFEQLDQMEK
QRKEEQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREANLTALAAIGPR
KKRKMDSPVRGASAEGSGSGPSQPGGSSGAGSRQFMRQRITRVNLRDLLFCLENERGTSH
SQLLYKGFLK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctccgatttgctggatgatgttttcttcaacacagaggtggacgaaaaa
gtagttagtgatctagtcgggtctctggagtgtgagctatcaggatcaggtcgcgtcagc
gcagcagtcaaggtccagtctgcagcaaattacgtcggcaaccaagctaaaggtagcaat
tccaatgttcagggcagcaaaatgggactttcacaacaagagcttgctaaagcagggaca
ggagtgcaaggaggtgtcattaacagtacggggtcccacggttcaggcatggatggagca
gtcgggaccacatcggcggcgggacagagtgtgacagccgctcagagtcagtccaagccg
gggatagctagcggagtcgttacggtagcgtcagactcaacatctggtgttgtgaaaccc
gggacgactgctgtgcaaactttgaatggaagtaccgtggtggtgaactgtcatgtcccc
ggaggcgcgtctgctgacagcagcggccacaactcgcagcccgccgtcgcgcttgtcaac
aacggacccgtgtctgtgagcaaagggagcgcggcggtcctgtcctcaacagccagcact
ataattcgaacttcctcgacgagtgtgcagaatgctgtgatttcggctccgtcgtctgtg
aaaagcgtacccacagtcacacttgtgaggccacctatgcaaactctcaccatcacctca
cagagtggagacaacccgaccgcagttttaacgtcgccggccgtcagcgtgagcagcacg
gcggctggctctctcgtcaacaaaactataattcagactggtggacacatcgtggcttcg
accgttgcgacagggacaaccgcgaccatgaggagtccgactgttttgcaaagcttgagg
acttcagtgccgtcaaccatcgccgccactcctccaggtggaatacgagctatcgccccg
caggttctggcccctcgactcgcccagcctcaacaaaacgtccagaacatccagctgcct
ccaggcatggtcttggttcgcagtgagagtgggcagctgctgatgattcaccagcagacc
ttggctcagatgcaggctcagtcgcagtcccagagcgccatgacaccgcgacccgcagcc
cccaccagcactccacctgtccagatcacttctctacaggctccaggcacatccctcctc
gctcgtccggttactcccaccaccattattaaacaagggtccacggtccagacctctgtg
acggccaccaccacactgcagaggcctcctgtactgcagaacaccatcatgctgggagga
actgccaccaccccgggacagccgatagcaacgcccgccacagtacagcctggatctgca
gccacagcagtaacacagagggtagggcctctcggggccactgggacccctgtcactcca
acagctatcacagctgagacactggaaaatgtgaaaaagtgtagaaactttctgtcaaca
ttgatcaagctggccagtggaaaacagtcctctgagaccactgccaatgtcaaagagctg
gtgaagaacctgctggaagccaagatagagcctgaagatttcaccagtaggttataccag
gagctcaactcctcaccgcagccataccttgtgcctttcctgaagagaagtctcccagcg
ctgcgtcagatgaccccagactcagaggccttcatccagcagagcctgcttcctcagccc
agcactccagcagcagcagcagcctccacggccctcaccgcggtggtgctgcgacctccc
ctctccaccgccgccactacggctaccagcactgccgcaaccaaaaccacagttatcagc
ctcactcagacacctcactctaaacctggaatgatagtaccccagcaacaggggacaata
gcaaggccacaggtgaccctggctcagtctcccatggtaacactgagaggacaatctcat
agccgcattattgtgggccagccgcaggttgtcaaacaactgcagacagcggtgaagcag
acgttggttccaggggccaaaggagttcaaatcgtcagtcaggcctctctcactgctgct
cagaagaacaagctgaaggaagcaggaggaggaaccttcagggatgatgatgatatcaat
gatgtggcctctatggcaggagtgaacctgtcagaggagagcgcacgtatcttagcaacc
aactctgagcttgttggcacggtcacccgttcctgtaaggatgagaccttcctttccacc
tcgtcactcacccggagagcactggagatcggtaagaagtttggcatcagcgagttgggc
acagacgtgatcaactacatttcccatgctacgcagcagcggctacaaaacctgctggaa
aaagtttcacaagtggcacagcagaagaacataaacttaaaggaggatgcgcggtacgag
caggtcggcgacgtgcgagctcagcttaaattcttcgaacagctagatcagatggaaaag
caaaggaaggaagagcaggagagagagattctcttgaaggctgccaagtctcggtcaagg
caagaagaccctgagcagctcagacttaaacagaaggccaaggagatgcagcagcaggag
ctggctcagatcagacagagagaagccaacctaactgcgttggcagcgatcggcccgagg
aaaaagcggaaaatggactctcctgttaggggtgccagtgcagagggctcagggtcaggc
ccctcccagcctggaggctccagtggagcaggctccagacagtttatgcgacagcgcatc
accagagtcaacctcagggacttgctcttctgtctggagaatgaaagggggaccagtcac
tcacaactgctgtataaaggattccttaaatag
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