Acanthopagrus latus (yellowfin seabream): 119023220
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Entry
119023220 CDS
T08233
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119023220
Spliceosome [BR:
alat03041
]
Common components
Common spliceosomal components
General mRNP proteins
119023220
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
119023220
NCBI-ProteinID:
XP_036960871
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All DBs
Position
7:7364801..7371632
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AA seq
524 aa
AA seq
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MADDFDVEAMLEAPYRKTSLMISHLYSHEFIFDSTVNCEKKDEIKSSHANGHDDQSKKKR
RSRSRSRSPGSKKRRSKSRDRKKGKKRSKSREKKRSRSRERHRSRSRSKERSGRYKARKS
PIRKRSKSRSPFRKEKSPIRAPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKV
RDVRMISDRNSRRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQVMAEKNRAAA
AANNLQKGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFIS
FADAECAKKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRL
QLMARLAEGTGLKIPPAAQQALQMTGSIPFGNIAAPAAVPTPAPSQALNLPSQPLATHCL
QLSNLFNPQAENDPSWANEIQDDVIEECNKHGGIVHIYVDKNSTQGNVYVKCPSIPAAMA
TVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPTRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgtagaggccatgctggaggctccatatagaaagacttcccta
atgatatctcacctctactcccatgaattcatctttgattccactgtgaactgtgaaaaa
aaggatgagatcaagtcctctcatgcaaatggacatgacgaccagagcaagaagaaaagg
agaagccgaagcaggagccgaagcccgggctctaagaagagacgaagcaaaagcagagac
agaaagaagggcaagaagaggagcaagagcagagaaaagaaacgaagccgcagcagagag
cgccatcgcagccgctcccgaagcaaggaacgttctggccgatacaaagcacgcaagagt
cccatccgaaaacgttccaaaagtcggagccccttcagaaaagaaaagagtcccatcagg
gcaccaattgacaatctaacaccagaggagagagatgcccgcacagttttctgcatgcag
cttgctgcaagaatcagagctcgagacctggaagatttcttctcagctgttggaaaagtg
agagacgtgaggatgatctcggacagaaactccaggagatcgaagggtatcgcatacatc
gagtttgttgaggcctcttctgtaccactggcgattggattgaccggccagaggcttttg
ggagttcccatcattgtacaggcctcacaggttatggcagagaaaaacagagctgcagct
gctgccaataatctgcagaagggcagttcaggtccaatgaggctgtacgtgggctcgctg
cacttcaacattactgaagagatgctgcgagggatctttgagccttttggaaagattgaa
ggaatccagctgatgatggacagtgagaccggacgatccaaaggatacggcttcatatcg
tttgcagatgcagaatgcgcaaaaaaggccttggagcaactgaacggctttgagctggct
ggacgcccgatgaaggttgggcatgttacagagcgctctgactcatcaacagccagctcg
ttcctggacaacgacgaactagagaggactggcatcgacctgggcaccacaggacgtcta
cagctaatggctcgactagcagaaggaactggtctgaagatccctcctgccgctcagcag
gctctgcagatgaccggatccataccgtttggaaacattgctgctcccgctgccgttcca
actccagctccaagtcaagccctgaacctcccatcacagccgctggccacacactgcctt
cagctgtccaacctcttcaacccacaagcagaaaacgatcccagctgggccaatgagatc
caagatgatgtcatcgaggagtgcaacaaacatggaggaattgttcacatttatgttgat
aagaactcaacccaaggtaatgtgtacgtgaagtgtccctcaataccagcagcaatggca
actgtaaatgcacttcatggacgctggtttgcaggcaaaatgataacagctgcttatgtt
cccctaccaacctaccacaaccttttccctgattcagtaacagcgaagcagcttctaatg
ccgacacgccgatag
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