Acanthopagrus latus (yellowfin seabream): 119023264
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Entry
119023264 CDS
T08233
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alat03400
]
119023264 (apex2)
Enzymes [BR:
alat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119023264 (apex2)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119023264 (apex2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
UPF0149
Amastin
Motif
Other DBs
NCBI-GeneID:
119023264
NCBI-ProteinID:
XP_036960958
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Position
7:complement(6943876..6947709)
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AA seq
582 aa
AA seq
DB search
MRIVTWNINGIRTFRGGIKKALDSLNADIICVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHEGAVGCYGDQDEFCSEELQLLDNEGRAI
ITQHRIMCQDKERTITVINVYCPRADPEKLERKQFKLQFYKLLQRRAEALLKDGSHVIVL
GDVNTSHRPIDHCDPCDSDDFEENPGRKWLNGFLHGVRQEEERNEEKHDEESEVTSADPK
NGHGKFVDTFRFFHPTRTSAFTCWSTLTGARQTNYGTRIDYIFADCQLTKEQFVAADIMP
EVEGSDHCPVWGQLSCSFLPSTKPPPLCTRYLPEFAGKQQKLSRFFAKVDQKPCPSEQRE
ALPGSQEEEERRENLNPSGAVSISGKKRLLTSDSVVPKGKKTKTVKTSSKPQGSLLSFFK
PKFTNLPSTGAPVRDCENTLGLEVIPSQNPQNASIPREDVASVSQLVPEETAPVFDRQPQ
LRTNSATDENEKRLKTKCLTPQPTVEHSAAKKGTSLGFWKSVLHGPPPPPSCKVHGEPCV
LRTVKKEGPNMGKQFFVCARPQGHASNPDARCNFFAWVDKGK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgtaacctggaacataaacggcataaggacatttagaggcggtattaaaaag
gctcttgattcactcaacgcagatattatctgtgtccaagagacaaaagtgacaagagac
ttacttgatgaaagaaccgccattgtcgaaggctacaactcctatttcagcttcagtcga
ggacgcagcggctactcaggggttgccacttactgtaaagacagcgccactccgttcgct
gcggaggagggtctcacaggtctgctgaccaaccatgaaggggctgttggatgttacggt
gaccaggacgagttctgtagcgaagagctgcagcttttggacaatgaaggacgagccatc
atcacacagcacagaatcatgtgtcaggacaaagagcgaaccatcactgtaatcaacgtc
tactgtccgcgggctgaccctgaaaagctggaacgaaagcagttcaagttgcagttctac
aagttgcttcagcgtcgggctgaagctctactgaaagatgggagccatgtgattgttttg
ggagatgtgaatacatctcaccggccaatagaccactgtgacccctgtgacagcgatgat
tttgaggagaaccctgggaggaagtggctgaatggctttttgcacggggtcagacaggaa
gaggagaggaatgaggagaaacacgatgaagaatctgaggtaacttcagcagatcccaaa
aatggacatggaaaatttgtggatacctttcggtttttccaccctactcgcaccagcgcc
ttcacatgctggtccactctcactggagcgcggcagaccaactacggcacgcgcatcgac
tacatatttgcggattgccagctcaccaaggagcagtttgtggcagcagatatcatgcca
gaggtggaggggtcagatcactgccctgtgtgggggcagctgagctgctctttccttccc
agcaccaaacctcctcccctctgtacccgctacctgccagagtttgcaggcaagcagcag
aaactatcccgcttctttgcgaaggtggaccaaaaaccatgtccgtctgagcagagggag
gctttacctggatctcaagaagaggaggagaggagggagaatttgaacccatctggagct
gtgagcatctctggtaaaaaacggttattgacatcagactctgttgttccaaagggaaaa
aagacaaagactgtaaagacttcatccaagccacagggcagcctcctttctttttttaaa
cccaagttcacaaatcttccctctactggagcccctgtcagggactgtgaaaatacactc
ggcctggaagttataccgtctcaaaaccctcagaatgcttcaatacctagagaggatgtc
gcctcagtttcacagctggtacctgaagagactgcacctgtctttgatcgtcaaccacag
cttcgcaccaacagcgccacagacgaaaatgagaaacggttgaagacgaaatgtttaacc
ccacagcccactgtggaacactcagctgccaagaaagggacatctttagggttttggaaa
tcagtgcttcatggaccaccgccgccaccctcctgtaaggtccacggggaaccctgtgtg
ctccgtactgtaaaaaaggaggggccaaacatgggcaaacagttctttgtgtgtgctcgt
cctcagggacacgcatccaaccctgacgctcggtgtaatttctttgcgtgggtggacaag
gggaagtga
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