Acanthopagrus latus (yellowfin seabream): 119023268
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Entry
119023268 CDS
T08233
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119023268 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119023268 (exosc10)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119023268 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Lipase
HisK_N
Motif
Other DBs
NCBI-GeneID:
119023268
NCBI-ProteinID:
XP_036960966
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Position
7:complement(18069474..18079723)
Genome browser
AA seq
894 aa
AA seq
DB search
MMASSSKSSDSTNSGLKDNSSDPSDEDKPELCPGFRDVDAFVKHGFGAVLSATKASASLP
QAGDEFDFYRSFPGFQEFCESQGDKLLHFMSQIMQVHGCRSHLRDRNKLTGLEERFDLVV
DSNDVILERVGILLDEADGVNRTQQPVMPAGFQPPKIVVSSWNRKGSGSGSRSEMFRLLH
AKNIARPQLKFKEKVDNSNTPFIPKIFIKPNAVKPLPSYFTNKQIRKERPEDLDVPAALA
DLIHQQRTQEHVEDMFAHPYQYELDHLEIPESLLSKPDVKMYKPMDESNFTFIDTLEDLV
ALNEKLCKLSEFAVDLEHHSYRSFLGLTSLMQISTREEDFIIDTLELRSELYILNEAFTD
PAIVKVFHGADSDIEWLQRDFGLYVVRLFDTHQASRALNLARHSLDHLLTHFCNVGSDKR
YQLADWRIRPLPDEMVQYARTDTHYLLYIYDCVRAQLLDFNHGQPGLLQSVWSKSKDISL
KKYVKPIYTEESYLEVQRKQKRSFNTQQLTAFRLLFAWRDKLARQEDESTGYVLPTHMMI
KISEELPKEPQGIIACCNPVPPLVRQQVNELHLLMQQAREMPLLKAEIAAQKNKGLTPIK
KPEVTLFGPHDTSRVSESDLHPFSTDEMPVKQGMLFSDDEHNMDVDVQKTSGLMAEAKIT
LFEEPRSLKDEDSLPVAQMKARRIIESFENPFRMYLPTSDVHINKNAKFDPSSKIFEISK
RWKLQSIEQQQKELEAKKKAKEETKQLAKKVADERNKAKQSYQESLQNVATVRQQAAGSA
KGSAKKRERVPSEVGESTPKPSKKPMTSAEKPQKTEPPPEESFKPFDYSQSDLKVFAGNK
SKDNTQFDPNRQAHDFKKKKFGRGQKSNLGAGGRSMSYMAGKSDRGFRHNWPKR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcttcttctaagagtagcgattccacaaacagtggcctcaaagacaacagt
tcagacccaagcgacgaggacaaacccgagttgtgtcctggttttagagacgtggacgcc
tttgttaaacatggatttggtgctgttttatccgccactaaagcatctgccagcttgccc
caagctggagatgaatttgatttctatcggagcttcccaggcttccaagagttctgtgaa
agtcaaggagacaagctcttacacttcatgagccagataatgcaggtccacggctgcaga
tctcacctcagagaccggaacaagctgacagggttggaggagaggttcgacttggttgtg
gactcgaacgacgtcatccttgaaagagtggggattcttcttgatgaagctgatggggtg
aaccggacccagcagcctgtcatgcccgcagggtttcagcctcccaagattgtcgtttcc
agctggaatcgcaagggttctggctctggcagtcgttctgagatgttccgactgctacac
gccaagaatatcgcaaggcctcagctgaaattcaaggaaaaagttgacaacagcaacaca
ccattcattcccaagatcttcatcaagcccaacgcagtaaagcctcttccttcctatttc
accaacaaacaaatccgtaaagagagacccgaggacctcgatgtcccggctgccctggct
gacttaattcaccagcagagaactcaagaacacgttgaagacatgtttgcacacccatat
cagtatgaactggatcatcttgaaataccagaaagccttctctctaagccagatgtgaag
atgtacaaaccaatggatgaatctaacttcaccttcattgacacgctggaggatttggtg
gctcttaatgagaagttgtgcaaattgtcagaatttgcagtggaccttgagcatcactcc
tacaggagtttcctcggtctcaccagtctgatgcagatctccaccagagaggaggacttt
atcatcgacacgttggagctccgcagcgagctgtacatcctgaacgaggcgttcactgac
ccggccattgtcaaggtatttcatggtgccgactctgacatcgagtggctccagagggac
tttggcttgtatgtcgtcagactttttgacacgcatcaggctagccgagctctgaacctg
gctagacattctctcgaccacctgctgacacacttctgcaacgtgggctcagacaaacgc
taccagctggccgactggaggattcgccccttgccagatgagatggtgcagtatgcccgg
acagacacccactacctcctttatatctacgactgtgtgagggcgcagctgttggatttc
aaccacgggcagcctggtcttctgcagagtgtctggagcaaaagcaaagacatttccctg
aagaaatatgtgaagcctatatacacagaggagtcatatctggaggtgcagaggaagcag
aaaaggtctttcaacacccagcagctcactgccttcagactgctgtttgcctggagggac
aagctggccaggcaggaagatgaaagcaccggatatgtcctgcctactcacatgatgatc
aagatatctgaggagctgcccaaagagcctcagggcatcattgcctgctgcaaccctgta
cccccgctggtgaggcagcaggtcaacgagctccatttgctcatgcagcaagccagagaa
atgcctctccttaaggcggagattgctgctcaaaagaataagggactcacaccgattaaa
aagccagaggtcacgctgtttggtcctcatgatacatccagggtctctgagagtgacctc
cacccgttttctacagatgaaatgcctgtgaaacaagggatgctattctcagatgatgag
cacaacatggatgttgatgtgcagaaaacaagtggtctcatggcagaagctaaaatcaca
ctgtttgaggagccaagaagcctgaaagacgaagactccctccctgtggctcaaatgaaa
gccagacgtatcattgaatcatttgaaaaccctttcagaatgtatttacccaccagtgat
gtacacatcaacaagaatgccaagtttgacccatcttcaaaaatattcgagatcagtaaa
agatggaaactgcagagtattgagcagcaacagaaagagctggaggccaagaagaaagcc
aaggaagaaacaaagcaactggcaaagaaagtggcagatgaaagaaacaaggctaaacag
agctaccaggagtctcttcagaatgttgccactgttcgccagcaagcagcggggtctgca
aaaggcagcgcaaagaaaagagagagggttcccagtgaggttggagagtcgactcccaaa
ccgagtaagaagccgatgacatctgcagagaagcctcagaagactgagccgcctccagaa
gagagctttaagccctttgactacagtcagtccgacctcaaagtatttgctggtaataaa
tcaaaggacaacacacagtttgatcccaaccggcaagcccatgattttaagaaaaagaaa
tttggcagaggacagaaatccaatttgggagctggaggccggagtatgtcatacatggct
ggaaaatctgacagaggattccggcacaactggcccaaaagataa
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