KEGG   Acanthopagrus latus (yellowfin seabream): 119023339
Entry
119023339         CDS       T08233                                 
Symbol
tnnc1a
Name
(RefSeq) troponin C type 1a (slow)
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04020  Calcium signaling pathway
alat04260  Cardiac muscle contraction
alat04261  Adrenergic signaling in cardiomyocytes
alat04814  Motor proteins
alat04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    119023339 (tnnc1a)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    119023339 (tnnc1a)
   04820 Cytoskeleton in muscle cells
    119023339 (tnnc1a)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    119023339 (tnnc1a)
   04261 Adrenergic signaling in cardiomyocytes
    119023339 (tnnc1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:alat04812]
    119023339 (tnnc1a)
Cytoskeleton proteins [BR:alat04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     119023339 (tnnc1a)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EH SPARC_Ca_bdg DUF1707 DUF5580_M FCaBP_EF-hand RNA_pol_Rpb4 Dak2 DUF5390 EF_EFCAB10_C
Other DBs
NCBI-GeneID: 119023339
NCBI-ProteinID: XP_036961084
LinkDB
Position
7:9657661..9661617
AA seq 161 aa
MNDIYKAAVEQLTDEQKNEFKAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELAELFRMFDKNADGYIDLDELKMM
LESTGEAITEDDIEELMKDGDKNNDGKIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atgaacgacatctacaaggcagcggttgagcagctgacagacgaacagaaaaatgagttc
aaggctgcctttgacatcttcgtacaagatgcggaggacggctgcatcagcaccaaggag
ctggggaaggtgatgaggatgctgggccagaaccccacaccggaggagctgcaggagatg
attgacgaggtggatgaagacgggagtggcacggtggactttgacgagttcctggtcatg
atggtgaggtgcatgaaggacgacagcaaagggaagtcggaggaggaactggcagagctg
tttcgcatgtttgacaagaatgcagatggttacatcgacctggatgagctgaaaatgatg
ctggagtccacaggggaggcgatcaccgaggacgacattgaggagctgatgaaagacggg
gacaagaacaacgacggcaaaattgactacgatgagttcttggagttcatgaaaggcgtg
gagtaa

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