Acanthopagrus latus (yellowfin seabream): 119023362
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Entry
119023362 CDS
T08233
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04020
Calcium signaling pathway
alat04148
Efferocytosis
alat04218
Cellular senescence
alat04310
Wnt signaling pathway
alat04370
VEGF signaling pathway
alat04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119023362 (nfatc2a)
04370 VEGF signaling pathway
119023362 (nfatc2a)
04020 Calcium signaling pathway
119023362 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119023362 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
119023362 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119023362 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119023362 (nfatc2a)
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
119023362 (nfatc2a)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
119023362
NCBI-ProteinID:
XP_036961122
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Position
7:5405080..5429140
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AA seq
902 aa
AA seq
DB search
MTSFYDERDLEEELTQINCPDDDLQFEYLFEYEPHCSDFAGGDQDDPNLASHKVLSPESE
QAFPLEEASPYGIKSCSPSYGGHSAEVLAGYENQEARNYLDSTRPAGLALSPRIEITPSR
EHYTHDSLQNHHLNISPRPTLTVPGHDNLAYREPQCLSPASSNSSTSWHSESYSPWASPC
VSPSNGQNPGDLCPRLQNIHTGSPRTSPGTSPGTSLAEDGCLGPRSPSPRPGSRSTSPQG
KRTYDMYRNPGLVPGHRSRSPSPHSGHEDHTIGAHYTHSSLADAMNGFGSGQPGLVPTKI
VKTTNQVYTLYPENHVEGNYLVSCEQDIKTKAAAEPFFVIPPIWSKPLVSSICSIPVASL
PPLEWPIPSRTDQYELHIEVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHGYRGKEPL
GLQIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKVIHGTKVLEIPLEPKNNMKAIID
CAGILKLRNADIELRKGETDVGRKNTRVRLVFRVHIPQPGGQYVSLQVASHPIECSQRSA
HELPMVEKQDMDSCSVLGGQQMILTGQNFSSDSKVIFLEKNQDGQQIWEMEATVDKDKSQ
PSMLFVEVPSYRDTSVCHPVKVNFYVINGKRKRSQPQHFTFTPLAAPSIKTEPIDEYEAD
HMGFAMPQILGLSPHSYYHNQRGVLHPDNGLVSGMASCQRLSSSLPNQEARFQQQSPAIM
YSRGGKSLSGSPGIYQQAGGIMPDPHRSVLVHTGSPAQALGPIVAGQHPSIIQFSPTNHL
LRAGDPQALTAPPQPDNQQIIYCDGYSPQAAAATHSPTPPQAQAAVTHPQHYPTVIQQQP
YTQKGQQKGRAPPGTGQMEAPGDGQRRVTVKEENLDQAYLDDGELNEIIRKDLTGVQARG
QT
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttttacgacgagagagatctggaggaagagctcactcaaatcaactgcccc
gatgacgatttgcagtttgagtacttgtttgaatacgagccgcactgcagcgacttcgcg
gggggtgatcaagatgaccccaacctcgcatcccacaaagtcctcagccccgagtctgag
caggctttccctctcgaggaggcctccccgtacggcatcaagtcctgcagcccgtcctac
ggtggacacagcgccgaggttctcgcgggatatgagaaccaggaggccagaaactacctg
gacagtacccgacctgcaggcctggccctgagcccgaggatcgagatcaccccctcccgt
gagcactacacccatgactccctgcagaaccaccacctgaacattagccccagaccgacc
ctcaccgtgcccggccatgacaacctcgcctaccgtgagccccagtgcctgagccccgcc
agcagcaactcctccaccagctggcactcggagagttactccccctgggcgtctccctgt
gtgtcccccagcaacggccagaaccccggagacctctgccccagattacagaacatccac
actggctcccctcgcacctccccgggcacctctcctggcaccagcctagctgaggacggc
tgcctgggaccccgctcgccctcccccagacctggctcccgctccacctccccacagggc
aaacgcacctacgacatgtacaggaatccaggcctggtccccgggcaccgctcccgcagt
ccctcccctcacagcggccatgaggatcacaccataggtgcccactatacacacagcagc
ctcgctgatgccatgaatgggtttggctctggtcagccaggcctggtgcccactaaaata
gtcaagacgaccaaccaggtttacactctgtacccagaaaaccacgtagaaggaaactac
ttggtgtcctgcgagcaggacataaaaaccaaagctgctgcagagcctttctttgttatc
cccccgatctggtccaagccgctggtctccagcatctgcagcatccctgtggcctcgctc
cctcctctggaatggccgatcccctcccgcacagaccagtacgagctccacatcgaggtg
cagcccaaaccgcatcacagggctcactatgagacggaggggagcagaggtgcagtcaaa
gcgcccacaggaggacatcctgtagtgcagctacacggctacagaggcaaggagccgctc
ggcctgcaaatcttcatcggtacggccgacgagcgcatcctcaagccccacgccttttac
caagtccaccgcatcaccggcaagacggtcacgaccaccagctacgagaaggtcatccac
ggcaccaaagtgctcgagatccccctggagcccaagaacaacatgaaagcaataatcgac
tgtgccgggatcctgaagctcaggaacgccgacatcgagctgaggaagggcgagacggac
gtcggtcggaaaaacacccgtgttcgtctcgtgtttcgtgtgcacatacctcagcccgga
ggacagtacgtctctctccaagtggcctcgcatcccatcgagtgctcccagcgatcggca
cacgagcttcccatggtggagaagcaggacatggacagctgctctgttctgggaggccag
cagatgatcctgaccgggcagaacttcagctccgattccaaggtcattttcctggagaaa
aaccaggatgggcagcaaatctgggaaatggaggcaacggtggacaaagataagagccaa
ccgagcatgctgttcgtggaggtgccgtcctacagagacacgtccgtctgccatcctgtc
aaagtcaacttctacgtcatcaacggcaagaggaagcgcagccagcctcagcacttcacc
ttcacaccgctggcagctccatccattaagaccgagcctatagacgagtatgaagcagac
cacatgggtttcgccatgccccagatcttgggcttgtcccctcattcctactaccataac
caacgcggcgtcctccatccagacaacggcctggtctccggcatggcctcctgccagcgc
ctcagctccagccttccaaaccaagaagcgcgtttccagcagcagagcccggccatcatg
tactcccgcgggggcaagagtctgagcggcagccccggcatttatcagcaggctggaggg
ataatgcctgacccgcaccggtcggtcctggtccacaccggctccccggctcaggctcta
ggtcccatcgttgcgggccagcacccttccatcatccagttctcccccaccaaccacctg
ctccgagcgggagaccctcaggccctcactgctcccccgcagcctgataaccagcagatc
atctactgcgacggctactccccccaggcagctgccgccacccactcgcctacgcccccc
caggcccaggcagcggtgacccaccctcagcactatcccaccgtgatccagcagcagccg
tacacgcagaaggggcagcagaagggccgagctccgcctggcacggggcagatggaggct
ccgggagacggacagaggagggtgacggtcaaggaggagaacttggaccaggcctaccta
gatgatggtgagttgaatgagatcataagaaaggatctgacgggcgtccaggccagaggg
cagacatag
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