Acanthopagrus latus (yellowfin seabream): 119023460
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Entry
119023460 CDS
T08233
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
119023460 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alat03400
]
119023460 (xpc)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
119023460 (xpc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
119023460
NCBI-ProteinID:
XP_036961301
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Position
7:complement(21050993..21060965)
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AA seq
932 aa
AA seq
DB search
MAKRRECAVSEADGVTKKLKQVLKEKSSGAKARAKKKDSGNGITGEEEKLEKKVKPKPRS
STKQATSTKTTTAKTSKYFQSPVKEEATDSEDDFDMVTSPPPRVRVNAKKTEKEHEEEEE
EEDSEEDDDDDWEEVEELAEPLGPVEPPEPVLPSHSVEIEIETPEVRKKKKRKAEFESYL
RRMMNRYQKDLLIDTHKVHLMCLIAGGMFRNRLCSEPDLLAITLSLLPAHYGTVAKERID
QNYLSGLLKWFRATFTLNPSLPHEERQDPRALLERRLASLSARNHQEMTHLFLLVLRSLQ
LFCRLVLSLQPIPFKPPPAKGKGAKISAGARKGNTTQDASKTSSPEQKVSPGTKRPAGGG
KTKGERGGKKAKRNEMKEEDKEDEEKIIISGGQRPKNSKRRSIASKVSYKEESNSEVEEL
SDDEEFQVTSDEEDSADSESGAKSTKKKGKGKGKAKETKSKRTAAPKRRSGGGKTQVKEE
EEEWEDEEEQEDEGERTTSNGTKGRSGKKKEGPGADEWLEVYLDKSSSWVCVDVEHGVGM
PHLCSQNATAPLTYVVSVDGDGFLKDLGKKYDPTWMTSSRKRRVDEEWWEETLEPFLGPE
YDRDLKEDKELQNKLMNKPLPISVGEYKNHPLYALRRHLLKYEAIYPSTATVLGYCRGEP
VYSRDCVHTLHSRDTWLKEARTVRLGEEPYKMVKGFSNRSRKARMASETKNENDLALFGE
WQTEEYQPPLAVDGKVPRNDYGNVYLFKPCMLPVGCVHLKLPNLHRVARKLDLDAAPAVT
GFDFHGGYSHAVTDGYIVCEEHEEILRAAWVEDQELQKQREKEKREKRATSNWTLLVKGL
LIRERLKQRYSKKNQGLGSLAQGETGGLSSDEEVVEGRSPGAKTASETLAMSWPQNRQAE
EEGGGVSGLKKKTTTKREKKGQEKHLFPFEKV
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcagagagtgtgcagtgagtgaggccgacggtgttacaaagaaactgaag
caggtgctgaaagagaagagcagcggagcgaaagctagagcgaagaagaaagattcaggt
aatggcatcacaggggaagaggagaagctcgagaagaaggtcaaacccaaaccacggtcc
tccacaaaacaagcaacgtccacaaagaccactactgccaaaaccagtaaatacttccag
tcaccagtgaaggaggaggcgactgatagtgaggatgattttgacatggtgacgtcacca
ccaccgagggttagagtgaacgccaagaaaaccgagaaagaacatgaagaagaagaggag
gaggaggacagtgaagaggatgatgacgatgattgggaggaagtggaagagctggcagag
ccgctgggtccagtagagccaccagaacctgtcctgccctctcattcggttgagatagag
atcgagaccccagaagtcagaaaaaagaaaaagaggaaggcagagtttgagtcgtatctg
cggcggatgatgaaccgataccagaaggacctgctaatagacacacacaaggtccacctc
atgtgcctgatagctggcgggatgttccgcaaccgtctgtgcagtgaaccagacctgctg
gccatcactctgtcgctgctgcccgcccactacggcacggtcgctaaggaacgtatcgac
cagaactacctctccggactgctcaagtggttcagagcaacgttcaccctcaaccccagt
cttccccatgaggagcgtcaggacccccgcgctctgctggagagacggctggccagcctg
tcagccagaaaccaccaggaaatgactcatctgttcctgttggtcctgaggtctctgcag
ctcttctgcagattggttctttctttgcagccgattcctttcaaaccccctccagccaag
ggcaaaggggcaaaaatatctgctggtgctagaaagggcaacacaacacaagatgcctcc
aagaccagctcccctgagcagaaggtctctcctggcaccaagagaccagcaggaggaggg
aaaaccaagggagaaagaggaggcaagaaagcaaagaggaatgaaatgaaggaggaggat
aaagaggatgaggagaagattataatatcaggagggcagagaccaaagaactcaaaacgc
cgcagcattgcctcaaaggtcagctacaaggaggagagcaacagtgaagtggaggagctt
agcgatgacgaagaatttcaggtgaccagtgatgaggaggacagtgcagattcagagagt
ggggctaaatctacaaagaagaagggaaaggggaagggtaaagccaaagagaccaagagc
aagagaaccgcagctcccaagagaagaagtggtggagggaaaacacaggtcaaggaggag
gaagaggagtgggaggatgaggaggaacaagaagatgagggagaacgaacgacgagcaat
ggaacaaaaggaaggagtgggaaaaagaaggagggacctggagcagatgagtggttggag
gtgtatctggacaaaagttcctcctgggtatgcgtggatgtcgagcatggtgtcgggatg
cctcacctctgctcccagaatgcaacagcgcctctgacgtatgtggtgtcggtggatggg
gacgggtttttgaaggacctaggtaagaagtacgatcccacctggatgacgtcgtccagg
aagaggcgggtggatgaagaatggtgggaggaaacactcgaaccttttctgggacccgag
tacgacagggacctaaaagaggacaaggagctccagaacaagctgatgaacaaaccactg
cccatctcagttggggagtataagaaccacccgctgtacgccttaaggagacacctcctg
aaatatgaagctatctatccttcaacagccactgtactgggatactgcaggggagagccg
gtgtactccagggattgtgtgcacaccctccactccagagacacgtggctcaaagaagca
cgaactgtcagactaggagaggagccgtacaagatggtgaagggtttctctaatcgttcc
cgtaaggccaggatggcgtctgagacaaagaatgagaatgacctggctctgtttggagaa
tggcagacagaagaataccagccacctttagctgtggatgggaaggttccccgtaatgac
tacggtaatgtctacctctttaagccctgtatgttgccggtgggctgtgttcacctcaag
ctgcccaacctgcaccgcgtggccaggaagctggacctcgacgccgcccccgcagttaca
ggctttgacttccatggaggatactcacatgctgtgactgatggttacattgtgtgtgag
gagcatgaggagattctccgagcagcctgggtggaagatcaagagcttcagaaacagagg
gagaaagagaaaagagaaaagagggcaacctctaactggactctgctggtgaaggggctc
ctgatcagagaacggcttaaacaacgctacagcaagaagaaccagggtttgggcagcctc
gctcaaggagagactggtgggctttcatctgacgaggaggtggttgagggcagaagtcct
ggagctaagactgcctctgaaaccctggccatgtcctggccccaaaacagacaagcagag
gaggaaggagggggcgtcagcggactgaagaagaagacaacaacaaaaagggaaaagaaa
ggacaagagaaacatttgttcccctttgagaaagtgtga
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