Acanthopagrus latus (yellowfin seabream): 119023812
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Entry
119023812 CDS
T08233
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119023812 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alat04812
]
119023812 (spast)
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
119023812 (spast)
Membrane trafficking [BR:
alat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119023812 (spast)
Cytoskeleton proteins [BR:
alat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
119023812 (spast)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
TIP49
Vps4_C
AAA_16
Mg_chelatase
MIT
IstB_IS21
AAA_14
AAA_24
NPHP3_N
DUF815
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
119023812
NCBI-ProteinID:
XP_036961892
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All DBs
Position
1:454385..461169
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AA seq
581 aa
AA seq
DB search
MGLWGRSGRKRTSSAAAPLNAVPAGNGAGTGRLGVLLSVSNPLLAALSLLRSLLCWLWSR
TAAAVRPEPRTADEPVGAKRQPRDGSGNPERGDRVRNHHGRAFECISTALRIDEDERGDK
QQAVGWYQRGIAELEKGIAIQISGGGEEYERDKRLQNKMSTNLIMAKDRLQSLVKVLSGS
GAQPGFYTDNINHIYHTANLRSGGAVSRKRDSVNLALSSRPKHKKTSCSSSSSSSGGRHS
SHLASQRPPAHSNNKVSTSRHSVNVGSSTSTPPKKDDRKNTKNIDGKLADLIRNEIVDSG
SSMSFHDVAGQDLAKQALQEIVILPALRPELFTGLRTPARGLLLFGPPGNGKTMLAKAVA
AESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSVIFIDEVDSLLCERREGEHD
ASRRLKTEFLIEFDGVQSGRDERVLVMGATNRPQELDEAVLRRFAKRIYVALPVEETRFK
LLKNLLEKHGNPLTHRELWQLARMTEGYSGSDLTSLAKDASLGPIRELRPDQVRNMEASE
VRNICLRDFVESLKKIKRSVSLQTLELYMDWNRNYGDTTAV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctggggcagaagcggcaggaagcggaccagcagcgctgcggctccgctgaac
gccgtcccagccggtaatggtgccggtaccgggaggctgggcgtgctgttgtccgtgtcg
aacccgctgctggccgcgctgtccctgctccgctcgctcctctgctggctttggagccga
accgcggccgctgtccgaccggagccccgaaccgcagacgagccggtcggagcgaagcgg
cagccgcgggacggcagcgggaacccggagcgaggcgatcgggtccggaaccaccacgga
cgggccttcgagtgcatctccacggcgctgaggatcgatgaggacgagcgaggggacaag
cagcaggcggtgggctggtaccagcgagggatcgccgagctggagaagggaatcgccatc
cagatctcaggaggtggagaggaatatgagcgagacaagcggctgcagaacaagatgagc
accaacctgatcatggctaaagaccggctgcagtcgttagtcaaggtgctgtcaggctcc
ggggctcagccgggcttttacactgacaacatcaaccacatctaccacactgccaacctg
cgctcaggtggtgctgtctccagaaagagggactctgttaatctcgcactatccagtcga
ccaaagcacaaaaagacgtcctgttcttcgtcctcgtcttcctcggggggccgtcactcc
tcacacctggcctcccagcgcccccccgcccacagtaacaataaggtcagcacgagtcgt
cacagtgtgaacgtcggctcctcaacatcgacaccaccgaagaaggacgacagaaagaat
acgaagaacatcgacgggaagcttgctgacctcatccggaacgagattgtcgacagcggc
tcgtctatgagcttccatgatgttgccggtcaggatttggcgaagcaagcgctgcaggaa
atcgtcatcctgccggccctgaggccggagttgtttacaggactgcgtactccagccaga
ggactgcttctgttcggtcccccaggcaacggcaagaccatgctggctaaagctgtggca
gctgagtccaacgccaccttcttcaacatcagcgccgccagcttaacctccaaatacgtg
ggtgaaggagagaagctggtccgagctctgttctctgtggccagagaactgcagccctcc
gtcatcttcatcgatgaagtggacagtctgctgtgtgagcgccgcgagggcgagcacgac
gccagccgacgcctcaagactgagttcttgatcgagtttgacggagtccagtcaggacgg
gatgagcgcgttttggtgatgggagccaccaacaggcctcaggagctggacgaggctgtt
ctcaggcgttttgctaagcggatttacgtggcgctgccggtggaggagactcgcttcaag
ctgctgaagaacctgctggagaaacacggaaacccgctgacacaccgagagctgtggcag
ctggccaggatgacggagggctactcaggcagtgacctcacctcattggctaaagacgcg
tccttgggaccaatcagagagctgcgtcctgatcaagtgaggaacatggaggccagcgag
gtccgaaacatttgtttgagagactttgtggaatcactgaagaaaatcaagaggagtgtg
agtctgcagactctggagctgtacatggactggaacagaaactatggagacacgacggca
gtatga
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