Acanthopagrus latus (yellowfin seabream): 119023959
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Entry
119023959 CDS
T08233
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119023959 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
alat03029
]
119023959 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119023959 (samm50)
Mitochondrial biogenesis [BR:
alat03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
119023959 (samm50)
Transporters [BR:
alat02000
]
Other transporters
Pores ion channels [TC:
1
]
119023959 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
119023959
NCBI-ProteinID:
XP_036962176
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All DBs
Position
8:complement(18427412..18433551)
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AA seq
472 aa
AA seq
DB search
MGTVHARSLDPLPMHGPELGVHADDIEAPEIEQQPKQEVLENKDVVVQRVHIDGLGRTKE
DLLTYEISEVFRAKNLIDVMRRSHEARQKLLRLGIFRRVEVVIDTSRGEDALPNGLDVTF
EVTELRRMTGSYNTMVGNNEGSMVLGLKLPNVLGRAEKMTFQFSYGTKETSYGLSFFKPQ
PGHFERNISLNMYKVTGQFPWSSLRETDRGVSAEMSFPVWKTSQTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLSHSMVIDTRNSSILPKKGGLLKIHQELAGYTGGDASFLKEDF
EIQLNKTLFWDSVLSASLWGGLLLPIGDKPTSIADRFYLGGPTSIRGFSMYSMGPQSEGM
AGDYLGGEGYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGQGPQAHLKK
LAECIRWSYGLGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccacgccaggagcctggaccctctgcccatgcatgggccagagcttgga
gttcatgctgatgacattgaggccccagagattgagcagcagccaaaacaagaggttctt
gaaaacaaggatgttgttgttcaacgagtgcacatagatgggctcggaagaaccaaggag
gacctgttgacttatgaaatctctgaggtcttccgggcaaaaaacttgattgatgtgatg
cgaaggtcccacgaggcccgacagaagctgctgcgtctcggtatcttcagaagagtcgaa
gttgttattgacacatcgcgaggcgaggatgctcttcctaatggcctcgatgtgacgttt
gaagtcactgagctgagacggatgacgggcagctacaacaccatggttggaaacaatgaa
ggaagcatggtactgggccttaagttacccaacgtacttggtcgggcagagaaaatgacc
ttccagttctcctacggcaccaaagagacatcctacggcctgtcctttttcaaacctcaa
ccaggacactttgaacgcaatatctctctcaacatgtacaaagtaacaggtcagtttcca
tggagttcactgagggagacggatcgaggcgtctctgcggaaatgagctttccggtatgg
aagaccagccaaacgctgaagtgggagggagtgtggagagagctgggctgtctggctcgc
actgcctcatttgccgtccgggaggagagcggtcattcactcaagtcctcactttcgcat
tctatggtcatcgacaccagaaactcttccatccttcccaagaaaggtggcctgttgaag
atccatcaggaacttgctggttacactgggggagacgccagtttcctgaaggaagacttt
gagatccagctcaacaaaacactcttctgggattcagtcctttctgcctcattgtggggc
gggttgctcctgcccattggtgacaaaccaacaagcatagcagacaggttctatcttggt
ggccccaccagtattagggggttcagtatgtacagtatgggcccacagagtgaaggtatg
gcaggcgactacctgggaggagagggctactgggctgggggcctccacctctacactcct
ctacccttcagaccaggcagggggggctttggtgacctcttcagaacacacttcttcctt
aatgcaggaaacctttgtaacctcaactatggtcaggggccacaagcacatttgaagaaa
ctggcagaatgcatccgttggtcatatggactgggcatagtgctgcgtttagggaacatt
gccaggcttgagctgaactactgcattcccatgggagtccagagtggagacaggatatgt
gacggggtccagtttggagcaggaatcagattcctatga
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