Acanthopagrus latus (yellowfin seabream): 119024038
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Entry
119024038 CDS
T08233
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119024038 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119024038 (lamb4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
119024038
NCBI-ProteinID:
XP_036962317
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All DBs
Position
8:complement(35103..77393)
Genome browser
AA seq
1841 aa
AA seq
DB search
MFVSGVLLPAQVCSFLPGGSRSRIHQSPQQLVNMIFIILIVFLPGTQLQDLQDLQDLQDQ
CPTGSCNPQLGDLMVGRAAQLSASSTCGLDGPQNYCIIGYLEEEQKCFTCDSRLPYNRYS
NPNSHRIENVITTFDPERKMKWWQSENGVHHVSIRLDLEAVFQFSHLVLTFKSFRPAAML
VERSKDFGQSWKVFRFFAEDCSLNFPSVSNQPANSVDDVICDSRYSGSQPSTDGEVVLKA
LDPIFEIENPYAPNIQDLITVTNIRVNFTRLFTLGDTLLGRRRRNPQDKYYYALYNMVVR
GSCFCNGHASQCTPVDRRRGDVFTQTGMVHGRCVCWHNTAGENCERCQDFHHDSPWRPGG
EDTIDICRRCNCHGHSDSCHFDAARFEETGGVSGGVCDDCRHDRTGPQCELCRPFLYQDP
QRVVEDPHACIPCDCDPAGSQGGGLCDALSGRCVCKENVDGQRCDRCKQGFFSLRQDNPA
GCQACRCHGLGSVGSCDQVTGSCECNLLATGPLCDRCLEGFWGLGNSAFRCSPCDCDIGG
AHSNRCSPEDGQCHCLPNMVGRRCSNPAPGHFLPPLDYFLYEAELAAPLHGRASSSPPPS
TPPSSSSLLNPVVLPKCEQYFREQGYDFKFTNGRVVLVRRTRRTPRTRHRRQGQQSSIPL
DPGHALQIVPRQKTADQPVTWTGLGLVRVLEGVGLRFTVDNLPSSMDYQLVIRYEPEAPS
DWLASVSITTVSLGDGSCSSDPAESKTLILPGNSRGAVLDSPVCLNTGGRYFVDIVFDKQ
PGSDVSSSSHILIDSMALIPSIESVQDFCSQSDLDAFRSFRCIGLAAKLSPQESLPEVCE
GLMKSMSARIHNGAAPCRCNVAGSLGPFCSELGGLCECKPNVIGRCCDTCAPLTFGFGPG
GCKPCECDPHGSVSELCDQIRGQCACRSDVTGRRCDRCQSGFWGFPFCRACECNGLSEEC
DEETGECLNCREHTTGPNCDRCMDGFYGDPVSRKPCQPCLCPDVQNSGRFFATSCQHNPQ
LLSMDCNCREGHTGPRCDRCSPGFYGNLALPGASCEECPCNNNIELGDRNACDGLTGECL
RCLHNTFGPRCQDCKPGYYGNALDQDCKECSCDRRGTEVTQCPLGSPCFCDSRTGQCPCR
TGVEGVLCDECEDGYWNLGGVSGCQPCSCDSVNSFSNICNKVTGQCPCRSEFGGRQCDEC
GENHFGNPDLQCISCDCNMEGTERPSCDPETGECICRLGVTGIFCDECAPGYDPTFPACR
QCHPCTALWTQDVTDVQRAALMMRNFIPHHSDNLRPENSRRRQGMLEIHSKLDTLSNLTG
LSLSKVEKVERLCAMIRKLTDVTDPNVILIDPSPLLNAEIENIHLEFKKLLNNLKQKVSE
DPDSEDEDVEEMLDEIKKLHRAFMSDEKRVRNANKAVEVSMDTRQEVKHKLSMCSSRGDL
APLEKRVKELSVVDLNRKVCGAAGLEDCSGCAGALCVVDLGKRRCGGPDCDGAVPVSQKA
SEMADRANEQLITLPSRLQESNNKINDAQQAAQDTKDQAKELQDRINDNMDSYEREKKKT
KELIQRVKDYLMDEMVPPEDIEKMARAVLDIQLPRSPDQIRSMINNINNLLSNTSNFQDN
LSNLEEHAMMGQDLLQKSQELKERTKNIDVTEITRNIYEAEKAQDKANDDLEAASRDRDT
TRDRVQDIKDKMDNIETKLMDHQVEALKDKIDALKKKTELNRQMARDARETADSVLNNTT
DVQTDLDDVRKLFELLKQKNENEMDQSGAGERLKNITEEVERMKRQVEDKLRQIKDLEEK
IHQLIRRKEDKAAEVSTLLETVDSLRKEISKRAEGYVSCTS
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtctcaggtgtgctcttacctgcccaggtgtgttcattccttcctggtggcagc
agaagcaggatccaccagagtccacagcagcttgtcaacatgatcttcatcattttaatt
gtttttcttccagggactcagctgcaagacctccaggatctccaggatctccaggatcag
tgtcccactggctcctgtaacccccagctcggtgacttgatggtgggtcgagcggcgcag
ctgtcggcctcttccacctgcggcctggatggaccacagaactactgcattattggatac
ctggaggaggaacagaaatgtttcacgtgtgactcacggctgccgtacaatcgctatagc
aaccccaacagccaccgcattgagaacgtcatcacgaccttcgaccccgagagaaaaatg
aagtggtggcagtctgagaacggtgttcatcacgttagcatcaggctagatctggaagca
gtgttccaattcagtcacctggtcctcaccttcaagagctttcgaccagcagccatgttg
gtagagcgttcgaaggattttggacaaagttggaaagtttttcgttttttcgcagaagat
tgttcgcttaattttccttcagtgtcaaaccaaccagctaacagcgtcgacgacgtcatc
tgtgacagcagatactccggctcacagccatccactgatggagaggtggtgctaaaagct
ttggatcccatctttgaaatagaaaacccttatgcacccaacatccaagatctaatcacc
gtgacgaatattcgggttaacttcactcgtctcttcacgctgggggacacgctactcggt
cgaagacgccggaaccctcaggacaaatattactacgctctttacaacatggtggtccga
ggcagctgtttctgtaacggacacgccagccagtgtacacctgtggaccgaagacggggc
gatgtcttcacccagactggcatggttcatggtcgatgtgtctgttggcacaacacagct
ggagagaactgtgagagatgtcaggactttcaccatgactccccctggaggccaggagga
gaagacacaatcgacatctgcaggagatgtaactgtcacggtcactcggactcatgtcac
ttcgatgctgctcgattcgaagagacaggcggtgtgagcggtggtgtatgtgatgactgc
cgccatgacaggacagggcctcagtgtgaactatgtcgaccttttctgtatcaggaccca
cagagagtggtggaagacccgcacgcctgcataccatgtgactgcgacccggctggttct
cagggtggtgggctgtgtgacgctctgagcggtcgatgtgtgtgtaaagaaaatgttgat
ggtcaacgctgcgatcgctgcaaacaaggcttcttcagtctgcgacaggacaacccagcc
ggctgtcaggcatgcaggtgtcatggtttgggaagtgtcgggtcatgtgatcaggtgacc
ggaagttgtgaatgcaaccttttggcaactggaccgctgtgtgatcgttgtctggagggt
ttctggggtttgggaaactctgcgttcagatgttcaccctgcgactgtgatatcggtgga
gctcacagcaacaggtgttctccagaagacggacagtgtcactgtttacccaacatggtg
ggtcggcgctgctcgaaccctgcccccggccacttcctgcctccactggactatttcctg
tatgaggcagaactcgctgctccgctgcatggaagagcttcttcttctcctcctccttcg
actcctccatcttcttcttctttgttgaatccggtggtgttaccaaagtgcgagcagtac
ttcagagagcagggttacgactttaagttcactaacggacgagttgttttggttcggcgc
actcggcgcactccacgcacccgccacaggagacagggacagcagagcagcatccctctg
gacccgggtcacgccctacagattgttccccgtcagaaaacagctgatcagccagtcacc
tggaccggcctgggattggtcagagtattagagggggtggggcttaggttcactgtggac
aacctcccatcatcgatggattaccagctggtgattcgttatgagcctgaggctccgtct
gactggctggcttcagtcagcatcaccacagtgtcgctgggtgacggcagctgcagcagt
gacccggcagaaagtaaaactctgatccttcctggaaactcaagaggagctgttctggac
tctcctgtgtgtctgaacacaggcggtcggtactttgtggacattgtctttgacaaacaa
cccggatctgacgtttcatccagttctcacatcctgattgactcgatggccctgattccc
agtatcgagtctgtccaagatttctgctcccagagcgaccttgacgctttccgcagcttt
cgttgcattggactggctgccaaacttagtccccaggagtcactaccagaagtttgtgag
ggactcatgaagagcatgtcggcacgaatccacaatggagcagctccttgcaggtgtaac
gttgctggctcgcttggacctttctgtagtgaactgggagggctctgtgaatgtaaacct
aatgtgattggccgttgttgtgatacgtgtgcaccactgacatttggattcggaccgggc
ggctgcaaaccatgtgagtgtgaccctcatggttcagtgtcggagctatgcgatcagatc
agaggtcagtgtgcatgtcgttcagatgtaaccggtcgacgctgtgatcgctgtcagtcg
ggattctggggtttcccgttctgtcgagcctgtgaatgtaacggactatcggaggaatgt
gatgaagagaccggcgagtgtctgaactgcagggagcacaccaccggacccaactgtgac
aggtgtatggatggtttctatggtgaccctgtctccagaaagccctgtcagccctgcctg
tgtccagatgtacagaacagtgggcgattctttgccacttcctgccaacacaacccacaa
ttgctcagtatggactgtaactgcagggaagggcacacaggtccacggtgcgacagatgc
agccctggtttctatggcaacctggcattgccaggtgccagttgtgaggagtgtccctgc
aacaacaacatcgagctgggagaccgcaacgcctgtgacggcctgacgggagaatgtctg
cgctgccttcacaacacgtttggaccacgatgccaagactgcaaacctggttactacggc
aacgccctggaccaggactgcaaagaatgctcctgtgaccggcgggggactgaagtgact
cagtgtcctctggggagtccctgtttctgtgactcgaggacaggacagtgtccctgcagg
acaggggtggagggcgtcttgtgtgacgagtgtgaggacggatactggaacctgggtgga
gtgtcggggtgtcagccatgcagctgtgactctgttaactctttctccaacatctgcaac
aaggtgacaggacagtgtccgtgtcgttctgaatttggaggaagacaatgtgatgaatgt
ggagagaatcactttgggaatccagacctgcagtgtatctcttgtgactgtaacatggag
ggaaccgagcgtccatcatgtgatccagaaaccggcgaatgtatctgtcggctcggagtc
actggtattttctgtgatgagtgtgcacccgggtacgacccaacatttccagcatgcagg
cagtgccacccctgcaccgccctctggacccaagatgtgaccgacgtccagcgagctgcc
ctaatgatgagaaacttcatccctcaccacagcgacaacctgcggcctgaaaacagtcgc
cgtcgacaagggatgctggagattcactccaagctggacaccctctccaacttgacagga
ctgtccctgtcaaaggtggagaaggtggagagactgtgtgcgatgatcaggaagcttaca
gacgtcacggacccgaatgtgatcctgatcgacccatctcctctcctcaacgctgaaatc
gaaaatattcatctcgagttcaagaagctgctgaacaacctgaagcagaaagtgtctgaa
gatccggacagtgaagatgaagacgtggaggagatgctggatgagatcaagaagcttcat
agagccttcatgtcagacgagaagagagtgagaaatgctaacaaagctgtggaggtttcc
atggacaccagacaggaagtcaaacacaaactgagcatgtgcagcagcagaggagacctg
gcaccactggagaagagggtcaaagagctcagtgtggtcgacctcaaccgaaaggtctgt
ggagcagcaggtctggaggactgctcaggatgtgctggagctctgtgtgttgtggatctt
ggaaagagaagatgtggaggtccagactgtgatggagcagttcctgtgagtcagaaggct
tcagagatggcagacagagcgaatgagcaactcatcacactcccgtccagactgcaggag
tccaacaacaagatcaatgatgcccaacaggcggctcaggataccaaagaccaagccaaa
gagctgcaggaccggataaatgacaacatggactcctacgagagagagaagaagaaaacc
aaggagcttatccagcgagtcaaagactatctgatggatgagatggttcctccagaagac
attgaaaaaatggcccgagctgttctggacatccagctgccacgatcacctgatcagatt
cgatcaatgatcaataacatcaacaatctgctgtccaacacctccaacttccaggacaac
ctgagtaacctagaggagcatgccatgatgggccaggacctgctgcagaaatctcaagag
cttaaggagcggacaaagaacattgatgtgacagagatcaccaggaacatttatgaagca
gagaaagctcaggacaaagccaacgacgacctggaagcagccagcagggacagagacacg
accagagatcgagtccaagacattaaagacaaaatggacaacatcgaaacaaagctgatg
gatcatcaagttgaagctctgaaggacaagatcgacgccctgaagaagaaaacagaactg
aaccgacagatggcgagagatgccagagagactgcagactctgtgttaaacaacactact
gacgtacagacagatctggacgatgtgaggaagctgtttgagcttctgaagcagaaaaat
gagaatgagatggatcagagtggagctggtgaacgactgaagaacatcacggaggaggtg
gagaggatgaagagacaggtggaggacaaactcagacagataaaagatctagaggagaag
atccatcagttgatcaggagaaaagaagacaaagcagccgaagtatccacgttgttggag
acagtggattccctccgaaaagaaatctccaaacgagcagaaggatacgtcagctgtact
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