Acanthopagrus latus (yellowfin seabream): 119024096
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Entry
119024096 CDS
T08233
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04620
Toll-like receptor signaling pathway
alat04621
NOD-like receptor signaling pathway
alat04622
RIG-I-like receptor signaling pathway
alat04623
Cytosolic DNA-sensing pathway
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119024096 (irf7)
04621 NOD-like receptor signaling pathway
119024096 (irf7)
04622 RIG-I-like receptor signaling pathway
119024096 (irf7)
04623 Cytosolic DNA-sensing pathway
119024096 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119024096 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119024096 (irf7)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119024096 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Pigment_DH
Motif
Other DBs
NCBI-GeneID:
119024096
NCBI-ProteinID:
XP_036962441
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All DBs
Position
8:complement(4312753..4318179)
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AA seq
437 aa
AA seq
DB search
MQSPPKPQFASWLIEQVETGQYTGLRYVDQNKFRVPWKHNSRKDCNDEDSKIFRAWAVAS
GKISEFPTDKARWKTNFRCALNNLSVRFKMVQDNSRNSDDPHKIYEIINTGHNYESVPIQ
DSQEDSDMTQDIYCSPTECIPSGAEHNLLNNFMALDLGNHPIVEEQPWADSYVQCNQDVL
GSYPVGAEIHQQLIPTQPTYYEANLPPVLSSPLQAMDLEISIHYRKREMLKVTYHTARLQ
LHYLHEALELEAHHICFPSTESLLDHKQIDFTNRILNSIQKGLLLEVRETGIYACRQDRC
HVFASTSDPSVAHPDPRKLPQNTMVELLNFEKYVNELKQFKDNNGSSPRYTINMCFGEKF
PDGKALEKKLIVVKVIPLICRQFHEMAQMEGASSLHSSNVSLQMSHNSLFDLINSVLGLP
TADLDPARAAAPFLPQS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctccgaagccccagtttgccagctggctcatagagcaggtggagacgggc
cagtacaccggcctgcgctatgtggaccaaaacaagttcagagtcccctggaagcacaac
tcaagaaaggactgcaacgatgaggacagtaaaatattccgggcgtgggcagtcgcgagt
ggtaaaatcagcgagtttcccaccgacaaggccagatggaaaaccaacttccggtgcgct
ctcaacaacctctccgtgcgcttcaagatggtccaggataactccaggaattcagacgac
cctcataaaatctacgagatcatcaacaccggccacaactatgaaagtgttccgatacaa
gattcccaggaggattctgacatgactcaagatatctactgctctcctacagagtgcatc
ccctcgggagctgagcataatctgctcaacaatttcatggccttggatcttgggaaccac
ccgatagtagaggagcaaccttgggcagatagctatgttcagtgcaatcaagatgtcctg
gggagctatcctgtaggagctgagatccaccagcagctgataccaacacagccgacttac
tatgaggcaaatcttccaccagtcctcagttcacctctgcaggcaatggacctggagatc
tccatccactacaggaagagggagatgctgaaggtcacgtaccacaccgctcgtctgcag
ctccactacctccatgaggctcttgagctggaggcccatcacatctgcttcccctccacc
gagagtctgctggaccacaaacagattgatttcaccaaccgcatcctgaacagcatccag
aagggtcttctcctggaggtgcgggagaccggcatctacgcctgcaggcaggacaggtgc
catgtgttcgccagcaccagtgaccccagtgtggctcacccagacccaagaaagcttccc
cagaacaccatggtggagctcctcaactttgagaagtatgtgaatgaactgaaacagttc
aaagacaacaacggcagctctcctagatacaccatcaacatgtgcttcggggagaagttt
cctgatgggaaagctttggagaaaaagctcatcgtagtcaaggtgatcccactgatctgt
cgacagttccacgagatggcccaaatggagggagcttcatcgcttcacagctccaacgtc
agcctgcagatgtcgcacaacagcctctttgatctcattaactcggtgttgggtctgcca
acagcggacctcgacccggctcgggctgctgcacctttcctacctcagagctga
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