Acanthopagrus latus (yellowfin seabream): 119024229
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Entry
119024229 CDS
T08233
Symbol
rpgrip1l
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119024229 (rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
alat03037
]
119024229 (rpgrip1l)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119024229 (rpgrip1l)
Cilium and associated proteins [BR:
alat03037
]
Primary cilia and associated proteins
MKS complex
119024229 (rpgrip1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
DUF2895
DUF1192
Motif
Other DBs
NCBI-GeneID:
119024229
NCBI-ProteinID:
XP_036962670
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All DBs
Position
8:459784..485453
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AA seq
1292 aa
AA seq
DB search
MNLNMSTLLDETAADVPVRDLTVNLSRLAAGPQDLSVYQNARARQDISRVSREELEDRFL
RLHEETLHLRQHINKQDDKIKKLGTKLMRLVKDRGRMEQLAAGGAGQPVCRVRDVGMEEI
IEELQDKVRGLQTENEGLKQRLLVAKQQLLNSQSSRPSPYGHVQSRVNSGLKKLRDDTSS
PSQTRPKSTRSLEGAGRPPTGLLPRFGHNLLEEARAEIRNLENVIELQRSHVEEMEGANQ
LLHDELRKKEAEYEEKLLHVRQQQTSKLRSHVNSNVTMIKLQKQLADRSNAVTELEGRFL
QLQESQRMLKTSHNAAMLKVDELSAQLKDERMKSLDLEKQLQSSTVARMKMDQLQERISE
LEQERDLLKDNNDKLVNSAFDVSQQQKWQIKEQQLKLQIVQLEMALKADLVDKNEILDKI
KAERDTSEKLTEENKKLEIQFLEQKQQLEELTDRLKFYSRENEYDVAELTEALLLIKTRK
SQKNGDLGFLKDVEEGASSVRELRAAHAETIQELQKTRNLLSMEGKICRDYKAELEAVLK
KMDGDRAEHEQKLERQAQLLDRRAAKIRKLEAQLRDVAYGTKTYVFKPDLTDEDEAEQLD
ETLHLERGENLLELQIVGATLSPSTLEVLGDGEPSTFCTYSLYLFELHSTPVVTGHKPKY
GFTSKYVVSMDDRFLDYLRRRCVTVELHQALGLDWRTLATGQLRLQQLLEQDGKVYGTAP
LVGVSDELRSFGSVDYWLRLRIPMTETIRLFKERVKAVGYIHTALKDDTQQLQPAGSSSW
NELHITVQCCRDLRSRSSQPPSPFVVYKFSDFPDYLTATIHDCCHPSFKELKSYSVPMDG
DLDRYLKSDVLQLYVFDYKEEQMDEYVGKARVPLLPLAQDEEISGVFELTDPSGLPAGHI
EVTLKWKFSYVPPSDAIMTVEESKFIPGQLEQENHSVEGREGDETLQVEAGELSHRSSSL
STGAASQARLPKLRHKTQVKEGLTAKKVTFVDPTASDSTRQVEDRSSAGVSAETTSSPAV
KHVLTPAAQNTEEEEEEEEDEEEESHFSEGQLVPVSSQSCSDDSEISEEMIEDVEEPPAA
KEDQSESTQSDSDDCIVHGHAAGRKPSERLRVEISSLSLRPECRVARDGSVVRLFVEYSL
LDLPTEETPLSLPKPPRGKSINYNYSKVVPVDAENNEARRRLLRGVLQGRNPQMERIVFT
VVSEPPEEEEQERECEDVGVAFLRIPEILERQQDLTETSLHVVDVEDRSEVIGSLTVSVE
GLEALQAIMEDQDQDQDQDQDLTPVSSLLPSA
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaacatgtccactctacttgatgagacagcggctgatgttccagtcagagac
ctcacagtgaatctgtcccgacttgcagcaggtccacaagatttatcggtgtatcaaaat
gctcgggcacgacaggacatctcgcgggtgtcaagggaggagctggaggaccggttccta
cgcctccatgaggagaccctgcacctcagacagcatattaacaaacaggatgataagatc
aagaagctgggcactaagctgatgaggctggtgaaggaccggggacgtatggagcagctg
gcagcaggaggagcaggtcagcccgtctgcagggtgagggacgtggggatggaggagatt
atagaggaactccaggacaaagtccgggggctgcagacggagaacgaagggctaaaacag
cgcctcctggtggccaagcagcagctcctcaactcgcagagcagcaggccgtctccatat
ggccacgtccaatcacgggtcaattctgggctgaagaagctgcgagacgatacttcttct
ccttctcaaactcgaccaaaaagtacgaggagtttggagggagcggggaggcctccgact
ggactcttacctcggtttggacacaacctgttggaggaggcgagggctgagatccgcaac
ctagagaatgtgattgagctgcagcggagccacgtggaggagatggagggagccaaccag
ctgctgcacgatgagctgaggaagaaggaggcagaatatgaggagaaacttctgcacgtc
cgacagcagcagacctccaaacttaggtcacatgtcaacagcaacgtgacgatgatcaaa
ctgcagaagcagctggctgacaggtccaacgctgtaacagagctggaaggacgatttcta
cagctgcaggagagtcagaggatgctgaagacgagtcacaacgcagcgatgctgaaggtg
gacgagctgtcagctcagctgaaagatgaacggatgaagagtctggacctggagaaacag
ctgcagagctcgactgtggccaggatgaagatggatcagctgcaggagcgaatcagtgaa
ctagagcaggagagagacctgctgaaggacaacaatgacaagctggtcaacagtgccttc
gatgtgtctcaacaacagaagtggcagattaaggagcagcagctaaagttacagattgtg
cagcttgaaatggcgctgaaggccgacctcgtcgacaaaaatgaaatccttgacaaaatc
aaggcagagagagatacaagcgagaaactgacagaagaaaataagaaacttgagatccag
tttctggagcagaagcagcagctggaggagctcacagaccgtctaaagttctacagcagg
gagaacgagtatgacgtggctgaactcactgaggccctgctgctcatcaagacgagaaag
tctcagaagaacggagatctgggcttcctgaaggatgtggaggagggagcgagcagcgtc
cgagagctgcgagctgctcatgctgaaaccatccaggagctgcagaagaccagaaacctc
ctcagcatggagggcaagatctgcagagactacaaggcggagctggaagctgtgttgaag
aagatggacggtgacagagcggaacacgagcagaagctggagcgacaggctcaactgttg
gacaggagggcagcgaagatcaggaagcttgaagctcagctccgagacgtcgcctacggc
accaaaacctacgtcttcaaaccagacctcactgatgaggatgaggcagagcaactggat
gaaactcttcacctagagcgtggagagaaccttctggaacttcagatagttggtgccaca
ctgtctccgtccaccctggaggttctgggtgacggagagccctccaccttctgtacgtac
tccttgtatttgtttgagctgcactccaccccggtagtgacgggccacaaacccaagtat
gggttcacatcgaagtacgtggtgagcatggacgaccgcttcctcgactatctgcgcaga
cgctgcgtcacggtggagctgcaccaggccctgggtttggactggaggacactggccacc
ggtcagcttcggctgcagcagctgctggaacaggatggaaaagtttatgggaccgcaccg
ctggtcggcgtgtctgatgagctgcgctccttcggctctgttgattactggttgagactt
cggatcccaatgacagagaccatccgcctgtttaaagagagagtgaaggccgtcggctac
atccacactgcactgaaggacgacacacagcagctgcagccggcaggcagcagcagctgg
aacgaacttcacatcacagtccagtgctgccgagacctccggtccagaagttctcagccg
cccagccccttcgtggtctacaagttctcagacttccccgattatctgaccgcgaccatc
cacgactgctgccacccaagcttcaaagaactcaagtcctactccgtccccatggacggc
gatctggaccggtacctgaagtctgacgtccttcagctctacgtgttcgactacaaagag
gagcagatggacgaatacgtggggaaggccagagtgcctctgctgccgctggcccaggac
gaggagatcagtggtgtgtttgagctcactgatccctctggacttcctgccggccatatt
gaggtgaccctgaagtggaagttcagttacgtccctccatcagacgccatcatgactgta
gaagagtccaaattcatcccaggccagctggagcaggagaatcacagcgtggagggcagg
gagggagatgagacactgcaggtggaggctggagagctttctcatcggtccagctctctg
tccacaggcgcagcgtctcaggctcggctgccaaagctcagacacaagacacaagtgaag
gaaggactgacggccaagaaggtcacatttgtagatccgacagcctctgacagcactcgg
caggttgaggacaggagctcagcaggtgtgtctgcagagacgacatcatcacctgctgta
aagcatgttttgactccagctgctcaaaatacagaagaagaagaagaagaagaagaagat
gaagaagaagagtcgcacttctctgaggggcagctggtcccggtcagctctcagtcctgc
tctgatgactctgaaatctcagaggaaatgattgaagacgttgaggagcctccagcagcc
aaagaggatcagagcgaatcgactcagtctgacagcgatgactgcattgttcatggacat
gcagcggggaggaagccgtcggagcgcctgcgtgtggagatctcgtctctgagcttgagg
ccggagtgtcgggtggcccgggacggcagcgtggtgcgtctgtttgtggagtactctctc
ctggatctgcccacagaggagacccccctgtctctccccaaacccccccggggcaagagc
atcaactacaactacagcaaagtcgttcctgtggatgctgagaacaacgaggcgaggcgg
cgcctgctgaggggcgtcctgcagggacgaaaccctcagatggagaggatcgtcttcacg
gtggtgagcgagcctccggaggaagaggagcaggagagggagtgtgaggatgtgggcgtg
gccttcctgaggatccccgagatcctggagagacaacaagacctgactgagaccagcctg
cacgttgtcgatgtggaggaccgcagcgaggtgatcggcagtctcactgtgtctgtggag
ggtctggaggctctgcaggccatcatggaggaccaggaccaggaccaggaccaggaccag
gatctaacccccgtctcctccctgcttccatcagcatga
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