Acanthopagrus latus (yellowfin seabream): 119024234
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Entry
119024234 CDS
T08233
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119024234 (irx5b)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119024234 (irx5b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
119024234
NCBI-ProteinID:
XP_036962681
LinkDB
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Position
8:complement(389112..394059)
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AA seq
409 aa
AA seq
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MSYPQGFLFQPSVSLALHSCPSFSTGVILGPRTEELGRSSSGSAFAPYSGSATSPGFNSH
LPYGGEPRAAATLSSFVSPGYDPSSGISGSLDYHPFGALGPYPYGDPTYRKNATRDATAT
LKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSED
EEEEDNIDLERTDEDEEPMKQNQDEAGSKSEAARRPSSVGGSCVLMFRDDSSSDTDRGFT
DPDFKDSGDGRLAHIAGPASTGAPSQNGPLGTLRASEPEHMSKEPVNSCNAIQGPNPAPK
PKLWSLAEIATSSNKSKGCSDSQQQQAPAPRTLFHHSPTLPRNLYYSSSFIPGYSSYGPL
GPLHGSPGSHLASSTHLNGLQQTMLQRAEAAARDCRLRSHELKKGTMSA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcctcagggtttcctcttccagccgtccgtgtctctggctctgcactcctgc
ccgtccttcagcaccggggtcatcctgggccctcggaccgaggagctcggccgctcgtct
tcgggctcagccttcgctccgtactccggatcggcgacctctcccggtttcaactcccac
ctgccgtacggcggagagccgcgggccgccgccacgctcagctccttcgtgagtcccggt
tatgacccgtcctcggggatctccggttccttggactaccacccgttcggggccctgggg
ccgtacccgtacggggaccccacctacaggaagaacgccacgcgggacgccacggccacg
ctgaaggcctggctcaacgagcaccggaagaacccgtacccgaccaagggcgagaagatc
atgctggccatcatcaccaagatgaccctgacccaggtgtccacctggttcgccaacgct
cgccgcaggctgaagaaggagaacaagatgacgtggaccccgcggaaccggagcgaggac
gaggaggaggaggacaacatcgacctggagcggaccgatgaggacgaggagccaatgaag
cagaaccaggacgaggcggggtccaagagcgaagccgcccggcggccttcctcagtcggt
ggctcttgtgtgttgatgttcagagacgacagcagcagcgacactgatcgaggcttcact
gatccggattttaaagactcaggggacgggaggttggcccacatcgctggccccgcctcc
acaggggccccttctcagaacgggcctctgggcaccctcagagcatcagagccggagcac
atgtccaaagagccagtcaactcctgcaacgccatccaggggccaaacccggcccccaaa
cccaaactgtggtctctggctgagattgccacatcctcaaataaaagtaaaggctgttcg
gactctcagcagcagcaggcgcccgcacctcggaccttgttccaccacagtcccaccctg
ccccgaaacctctactacagctcctccttcatccctggatactccagctacgggcccctg
gggcccctgcacggcagccccggctcacacctggcctccagcacacatttaaatggatta
cagcagacgatgctgcagagagccgaggcggcggccagagactgcaggctgcgcagccac
gaactgaagaaaggcacaatgagcgcgtga
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