Acanthopagrus latus (yellowfin seabream): 119024304
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Entry
119024304 CDS
T08233
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119024304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119024304
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119024304
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
HECT type E3
119024304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119024304
NCBI-ProteinID:
XP_036962838
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All DBs
Position
8:26347796..26358932
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AA seq
1032 aa
AA seq
DB search
MFSWGEHSLRGFRLRHGALADSHRRDADGDDADCDDDDDGVQYADLGYHITDLSAGHSVL
AFCKSNGNSFIIRTNESQDGRRVRGKQIMVTCPCCVSLSEFVQCKEKIVAVSCGDDTVTL
LSDRGNVLCVDTAHTYIPRPVEALSNITVSQVACGSRHSVALTKDGQVYTWGQDSRGQLG
LGKRKLGASSPQHLRSLSALPLVQVSAGGEQSFALSVSGGVFGWGRNDCGQLGLGDRTDR
HTPTAVQCLNLKKTVHISCGKDHTVTLTKTGAVFTFGSGQHGQLGHNSFCDELRPRLVAE
LWGAKVTKITCGRHHTLVLTDSKRIYSFGRGEEGQLGHGEESHPSVPLPVKLPRDSADDP
KITNIFVGGNCSFAICTSDEEVHDESDITNSVAQHCLDSMVDKWIAECNSKSWKKIKQEI
HRTFSSASCVNKSFLEQSKDKHFLTSPKYSGLKLSLARRAFKKLVKKDDVIAEVEAAVQH
LLPSLDRKPVGVEGLRIHLLLMELLYVIQRHKRQETSTRLAEAVAAAVLRLSDDSLQVIG
DWWSSLSPSTMVKHVKVWKQALSAVLSFKPVPRNSGVRNLLLVLQYMYNANCRIAEPQRL
PESDFNLLIDKEFLREDVLFWRSRLKRKKMNAEPLILCSFPIVMDLQSKKLAFDINANST
KWETIFQIICSMPFEYGFPLPQDVFFEMDLRRAAVLEDTFKQMATAHHTDYKMPLVVYFD
KNRTIDNLCRKDFFYKVFHDLVSLDTGMFMFNDNETLAWFPSKATQEDQRYFQFGVLCGL
ALYNGCIIHLPFPLALFKKLLGVKPSLQDLLELSPVVGVSLQYILEDCQDDDLENLEMDF
VISWDGTEIDLDPKNPEKPVTSENKKEFVEAYVNHVFNTSVEGVFEEFKRGFFQVCDRDL
VKLFRPKELQEVLVGKDLLDWAKLKQNTVYEGGYHPDHPTIQMFWEVFDELNEDQKKAFL
WFVTGFERVPILGMETIEMKVGVVKIQDLSYDQYYPQTHTCFSTLELPLYSTKEIMQTKL
IEALSNSKDIYK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctggggagagcacagcctgcggggcttccgcctcagacacggagccctcgcc
gacagccaccggcgtgatgctgatggtgatgatgcggattgtgatgatgatgatgatggg
gtccagtacgcagacctcgggtaccacatcacggacctgtcggcaggtcacagcgtgctg
gccttctgcaaaagcaatggaaactcgttcatcatcagaacgaacgagagccaagacggg
agaagagtcagagggaagcagataatggtgacatgcccctgctgtgtctccctctcagag
tttgtgcaatgtaaggagaagatcgtggctgtgagctgcggagacgacacagtcacgctg
ctgtcagacagaggaaacgtcctgtgtgtggacacagctcacacctacatccctcggcca
gtggaggctttgagtaacatcacagtcagtcaggttgcctgtgggagccgtcactcagtg
gccctgaccaaagatggtcaggtgtacacatggggccaggactccagaggccagctgggt
ctggggaagaggaagctcggtgccagttcaccccaacacctccgatctctgtcagcgctc
cctctggtccaggtctctgcagggggagagcagagcttcgccctctctgtgtctggaggt
gtgttcggctggggcaggaacgactgtggacagctggggctgggagacaggacagacaga
catacacctactgctgttcaatgcctgaacttgaagaaaactgtccacatttcctgtgga
aaggaccacactgtcactctgaccaagacgggtgcagtgttcacctttggctccggtcaa
catggacagctcgggcacaactcattctgcgatgaactgcgacctcggctggttgcggag
ctctggggggcaaaagtcaccaagatcacatgtggacgacatcacacattagtactaaca
gactccaagaggatctactccttcgggcgcggagaagaaggtcagctgggacacggagag
gagagtcacccgtctgtgccgctacctgttaaactgccacgagactcggctgatgatcca
aaaattacaaacatcttcgtaggaggaaactgttcgtttgcaatatgcacgtctgatgag
gaagttcatgatgagtcagacatcacgaacagtgtagcacagcattgtcttgatagcatg
gttgacaaatggatcgctgaatgtaattcaaagtcgtggaagaagataaaacaggaaatt
cacaggacattttcctctgcatcctgtgtgaataagagcttccttgaacaaagcaaagac
aaacatttcctgacttcaccaaagtactctggcctgaaactgtctcttgcacgacgtgcc
ttcaagaaactggtgaaaaaggatgatgttatagctgaggttgaggctgctgtccagcac
ttgcttccctcccttgataggaagccggtgggtgtggaggggttgaggatccacctgctt
ctcatggagctcctgtatgtgatccagagacacaaacggcaagaaacgagcacaaggctt
gctgaggcagtcgctgctgcagtactacgcttgtctgatgacagcctccaggtcatagga
gactggtggtcctcgctgtcgccctccaccatggttaaacatgtaaaggtgtggaagcag
gccctctcagcggtcctgtcctttaagcctgtacctcgcaactctggagtcagaaacctg
ctgctagtgctccagtacatgtacaacgccaactgcaggatcgcagaaccacagaggttg
ccagaaagtgattttaatctgttgattgacaaagagtttcttcgtgaggatgtgctgttt
tggcgttcaaggttgaaacgcaagaaaatgaatgcagagccactcatcctctgtagtttt
ccaatcgtgatggatctgcaatcaaagaaactggcttttgatataaatgctaacagcacc
aagtgggaaacaatttttcaaatcatctgcagcatgccatttgaatatggattcccatta
cctcaagatgtgttctttgaaatggacctgaggagagcagctgttttggaagacaccttc
aaacaaatggctactgctcatcacactgactacaagatgccacttgtggtatacttcgac
aaaaatcgaacaattgataatctttgcagaaaagactttttctacaaagtctttcacgac
ttggtgtcacttgatactggcatgttcatgttcaatgacaatgaaacgctggcatggttc
ccctccaaagcaacacaggaggaccagagatacttccagtttggggttctgtgtggattg
gctttgtacaacggctgcatcattcacctgcccttcccactggctctgttcaagaagctg
ctgggtgtaaagccttcactgcaggatttgttggaactcagcccagttgttggagtgagt
ctgcagtacattctggaagactgccaagatgacgacttggaaaacctggagatggatttt
gtcatcagctgggatgggacagagatcgaccttgatcctaaaaatcctgaaaagccggtg
acaagtgaaaacaagaaggagtttgtggaagcctacgtgaatcacgtcttcaacacatcg
gtggagggcgtgtttgaggagttcaagcgaggcttcttccaggtgtgtgaccgagatctg
gtgaagctgttccgaccgaaggagctgcaagaagttttggtgggcaaagacctccttgac
tgggcaaagctgaaacagaacacagtctatgaggggggctaccatccggaccaccccacc
atacagatgttttgggaggtttttgatgaactaaatgaggatcagaagaaagctttcctt
tggtttgtgacaggctttgaaagggtgccgattcttggcatggaaacgatcgagatgaaa
gtcggagttgtcaaaatccaggacctctcctacgaccagtactacccgcagacacatacg
tgtttctcaaccctggagctgcccttatactcaactaaagagatcatgcaaaccaagctg
atagaggccctgagcaacagcaaagatatctacaagtga
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