Acanthopagrus latus (yellowfin seabream): 119024312
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Entry
119024312 CDS
T08233
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04150
mTOR signaling pathway
alat04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119024312 (lrp5)
04150 mTOR signaling pathway
119024312 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119024312 (lrp5)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119024312 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
EGF
Insulin_TMD
cEGF
Motif
Other DBs
NCBI-GeneID:
119024312
NCBI-ProteinID:
XP_036962867
LinkDB
All DBs
Position
8:complement(29579075..29681050)
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AA seq
1648 aa
AA seq
DB search
MELKRRRLEMGRLLLLFLLRSCLLSAVDGTPLLLFANRRDVRLVDTEGVRGESAIVVSDL
EDAAAVDFLYAEGLIFWTDVSEEAIKQTQWNQSSNSLKEALGTGQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALNPAQCYMYWTDWGEEPR
IERAGMDGSNRKVIVDVDIYWPNGLTIDLVEQKLYWADAKLSFIHRANLDGSTRETVVEG
TLTHPFALTLSEETLYWTDWQTRSIHACNKHNGDKAREILSGIYSPMDIQVLEPYRQPYI
RTPCSDNNGGCSHLCLLSPVQPAYSCACPTGVQLKPDGKTCKPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSHIDGSNAMMLVTTEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNGYMYW
TDWGEHPKIERANLDGMDRVVLLNSSLGWPNGLALDYAAGKLYWGDAKTDKIEVINVDGS
NRQTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKATK
MTETHGTNGCAQNNGRCSHLCFWSRQAVSCACPIGMELLSDLQTCVVPEAFLLFTNRDNI
RSISLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEF
GLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALD
PANGYMYWTEWGGRPRIARAYMDGSTITTLVDKVGRANGLTIDYVDQRLFWTDLDTCMIE
STNMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLEL
MLDILVFHSSRQEGTNDCLHNNGNCAHLCLATPAGAQCRCASHYTLNSDGQNCSSPSSFL
LFSQKASISRMVLGEQSPDIILPIHVLRNVRAVNYDPLDRLVYWLDGRQNIRRARDDGAM
PSMIVSSSVQPVDNQLHDLSLDPYSRHIYWTCETTNTINVQRMDGHTVGVVLKDDTDKPR
AIVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWID
ADLKRIESSDLTGANRIVLQDSNILQPMGLTVLGDYLYWIDRQQQMIERVDKLTGDGRTR
IQGRISYLTSIHAVEEMEPQEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQDL
LHCGEPPTCSTEQFTCSTGEIDCIPMAWRCDGFPECDDSSDEENCPVCSAFQFQCDKGGC
IDAQRRCNGEPDCADHSDEQDCETICPPNQFRCGDNQCITKKQQCDSYSDCPDGSDELAC
EYVSPPSSGIPNTGPNTIGPVIAIILLVFVIGGAYFVCQRVVCRRYKGPSGTFPHEYISG
TPHVPLNFIAPSSSQHGTFQGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSS
TKGAFYPQILNPPPSPATDRSLYNTEVFYSSNSPSTTRSYRPYHPVRGAAPPTTPCSTDV
CDSDYTPHHPPSGLASSTGRWKAAGHGSHGKHNKYYMDLNSDSDPYPPPPTPRSQYLSAE
ESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaagcgtagaagacttgaaatgggccgtctgctgctgctttttctgctgcgg
agttgcctgctgtcggcggttgacggcacacctctcctcctctttgctaaccggcgtgat
gtacgattggtggatacagagggcgttcggggtgagtcagccatcgttgtgagtgacctg
gaggatgcagcagcggtggacttcctgtatgctgagggcctgatattttggacagatgtc
agtgaggaggccattaaacagacgcaatggaatcagtcatccaactctcttaaagaggca
cttggaactggtcagactgtggtagtatcagggctggacagtcctgatgggctggcctgt
gactggttgggaagaaaactctactggacagactcagagaccaatcggattgaagtggcc
aaccttgatggcacctctaggaaagtcctgttttggatggacttagaccagcccagggct
atcgctctcaacccggcacaatgctacatgtactggacagactggggagaggagcctagg
atagaacgtgctggtatggacggcagcaacaggaaagttatagtggacgtggacatatac
tggcccaatggtcttaccattgacctggtggaacagaagttgtactgggcagatgccaaa
ctcagcttcattcacagagctaaccttgatggatcaacacgtgaaacagtggtggaggga
accctgacccatccttttgcactaacattgtctgaggagaccttatactggactgactgg
cagacccgctccatccatgcctgtaacaaacacaacggcgacaaagccagggagatcctt
agtggtatttactctcctatggacatccaggtcctcgagccctatcgacagccttacatc
cggacgccatgtagtgacaataatggaggctgcagtcacctctgcctactttctccagtc
caacctgcctacagctgcgcctgccccactggagtccagctaaaaccagatggaaagaca
tgcaagccaggagctgagcaggttctgctgttggctcgacgaactgacctgaggagaatc
tcacttgacctgccagatttcactgacatagtgctacaggttgatgacattcgccatgct
atagctatagattatgacccagttgagggttacgtttattggacggatgatgaggttcgg
gccatccgccgatcccacattgatggcagcaatgccatgatgttggtcaccacagagatc
aaccacccagatggcattgctgtggactgggtggccagaaacctgtactggactgacact
ggcaccgaccgaattgaggttaccaggctcaatggaacctctcggaaaattttgatatcg
gagaacctggatgaacccagagccattgtcctggaccctgttaatggctacatgtactgg
actgactggggtgaacatccaaaaatcgagagggctaaccttgatggaatggaccgggtg
gttctactcaacagctctcttggctggcccaatggattggctctagattatgcagcagga
aaactatactggggagacgctaaaactgacaagatagaggttattaatgtggatggcagt
aacagacagactctgctggaggacaagctgcctcatatctttggttttactttgctgggt
gattacatctactggactgactggcagagacgcagcattgagagggttcataaagccacg
gctgtacgagaaatcatcatcgatcagctgccggatttaatggggctgaaggccactaaa
atgacagagactcacggtacaaatggctgtgcgcagaataatggcagatgcagccatctg
tgtttttggagtcggcaggctgtcagctgtgcctgtcccatagggatggagcttctttca
gacctgcagacctgtgttgtgccagaagccttcctgctcttcaccaacagggacaacatc
aggagcatttctttgggtaccaacagcaatgacgtggccattcctctgactggagtcaaa
gaggcctctgctctggacttcgatgtctctgaaaggagaatatactggacagacatacag
gccaagacaatcagcagagcatatatgaatggcagctctgtagaacatgtcatagagttt
ggactggactacccagaaggtatggcagttgactggatgggtcgtaacatctactgggct
gatacaggcactaaccgcatcgaggtggcccggctggatggccagtaccggcaggttcta
gtctgtaaggaccttgacaacccacgttcactggacaacccacgatcgctggcgttggac
cctgccaatggctacatgtattggacagagtggggtggtcgacctcgcatagccagagca
tacatggatggcagcaccatcaccaccctggtggataaagtgggccgggcaaacggacta
accattgactatgtagaccagcgactcttctggactgatctggacacgtgcatgatcgaa
agcaccaacatgcaaggtctgcagagggagatcatagtagacgaccttcctcatcctttc
ggtctgactcagtaccgggattttatctactggacagattttaacctgcgtagcattgaa
cgggcagacaaacgcagtggactaaaccgcactgtggtgctgcagggccagctggagctg
atgttggacatcttggtgttccattcctcccgccaggaggggaccaacgattgcttacat
aacaatggcaactgtgcccacctttgcctcgccacacctgctggtgcccagtgtcgctgt
gcctcccactacactttgaacagtgatggacaaaactgtagctccccctctagttttctg
ctcttcagtcagaaggctagtatcagcaggatggttttgggagagcagagtcctgacatc
attctgcccattcacgttctgaggaatgtccgggctgtcaactacgacccactggaccgg
ctagtctactggctggatggacgacagaacatacgcagggccagagacgatggagccatg
ccttccatgatagtcagcagcagtgtccagccagtggacaaccagcttcatgacctgagc
ctggacccctacagtcgccacatttactggacctgtgagactaccaacaccatcaacgtc
cagaggatggatggacacactgtaggcgtggtcttgaaggatgacactgacaagccacgg
gccattgtggtcaatgctgagaaagggtacatgtatttcaccacagtgcaggagcgctca
gccaagatcgaaggagccagtctggatgggacagaacgagagtctctgttcactaccggt
ctcatcaggccagtagccctggctctggacaacaaactgggaaaactgttctggatcgac
gctgacctcaaacgcattgagagcagtgatctgacaggagccaatcgcattgtcctccag
gattccaacattcttcagccaatggggctgacagttcttggagattatctgtactggatt
gaccggcagcaacagatgatagaaagggtagacaaactgaccggagatggacgcacgcgt
atacagggacggatatcatacctgacctccatccatgctgtggaagagatggaaccacag
gagtttgcatcccacccttgttcccgtgacaatgggggctgttcacacatctgcattgct
aagggtgacggcacaccccgatgctcctgccccatgcacctggtgttactgcaggacctg
ctgcactgtggagagcctcccacgtgctccacagagcagttcacctgctccacaggggag
atagactgtattcctatggcctggcgctgtgatggcttccctgagtgtgatgacagcagt
gatgaggagaactgccctgtctgctcagccttccagttccagtgtgataaaggaggctgc
attgatgcccaaaggcgctgcaatggtgaacccgactgtgctgatcactctgatgagcag
gactgtgaaaccatctgtccccctaaccagttccgctgtggtgacaaccagtgtatcacc
aagaaacaacagtgtgacagttactctgactgtccagatggatcagatgagcttgcctgc
gagtatgtgtctcctccctccagtggcatccctaatactgggcctaacaccatcggccca
gtcattgccatcatcctgcttgtctttgtgattgggggagcttattttgtctgccagcgt
gtggtgtgtcgacgctacaagggtcccagtgggacttttcctcatgagtatatcagtggt
acgccccatgtgcctctcaattttatcgcccccagcagctcacagcatggtaccttccaa
ggtatttcctgtggaaagtccatgatgagctcagtcagcctgatgggcagcagcagcagt
ggggctcctctctatgacaggaaccatgtgactggagcctcatctagcagctcatcatct
accaagggagccttctaccctcagatcctgaaccctcctccatccccggctactgatcgc
tctctctacaacacagaagtcttctactcatccaacagtccatccaccaccagatcatac
agaccataccatccagtccgaggtgctgcaccacccactacaccctgcagcactgatgtc
tgcgacagtgactacacccctcaccatccgccgtctggcctggcatcatcgacgggccgt
tggaaggccgcaggccatggcagccatggcaaacacaacaagtactacatggaccttaac
tcagactcggacccctatcctccaccccctaccccccgctcccagtacctgtcagctgag
gagagctgccctccgtccccttcaactgagcgctcctacttccacctgtgcccccctcct
ccttcgccctgcaccgactcctcgtga
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