Acanthopagrus latus (yellowfin seabream): 119024367
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Entry
119024367 CDS
T08233
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03022
Basal transcription factors
alat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119024367 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
119024367 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119024367 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119024367 (gtf2h1)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119024367 (gtf2h1)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119024367 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
119024367
NCBI-ProteinID:
XP_036963003
LinkDB
All DBs
Position
8:complement(11854402..11860309)
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLILHTGESTTFHFSNESSALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGDINNSDSTPYNNKQDVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYGENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSMVVQGVKNPLVDLLSLEDKTLDEGYGASATTPSTSSANRTVKES
SNAAIIKRFNHHSAMVLAAGSRKGETPTDQASETSSTDGNSRDSDLFQPPVKKVRLQEAI
EYEDLQRENRLKTVALNLKKSDRYAHGPVPLQSQHYTTSQDIINSVNYIRHEMVNYKPNL
TQVLSSTAASSAITALSPGGVLMMTGTQQAINQMVPTEVQGELKHLYAAAGELLRHFWSC
FPVNSPFLEEKVMKMKTNLERFQMTKLCPFQEKIQRQYLSTNLTGHLEEMLQTAYSKFHI
WQTRRMLRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactatcagaggaggtgctgctggtggtcaaaaaggttcgccagaggaagcag
gatggcacactttatctgatggctgaacgtatagcctggggtcctgagggcaaagaccgc
ttcacagtcagccacttgtatgcagatattcgctgtcagaagatcagcccagatggtaaa
gctaaaattcagctccagctgatccttcacaccggtgagagtaccacattccacttttcc
aatgagagcagtgcactcaaagacagagatgctgccaaagaactgctgcagcagctgctt
cccaagttcaagaagaaagctaacaaggaactggaggagaaaaacaggatgcttcaagaa
gatccagtgcttttccagttgtataaggatcttgtggtgagccaagtgatcagtgctgac
gagttctgggccaaccggttaggagacataaacaactcagactccacaccatacaacaac
aagcaggatgtcggtatatcaggagcctttctggcagatattagacctcagacagatggc
tgcaatggtttgagatataatctgacagctgacatcattgaatccatcttcaggacatac
cctgcagtgaagcagaagtatggcgaaaatgtgcctcataacctgacggagaaggagttc
tggacccggtttttccagtcccattattttcacagagaccgtatcaacacaggaacacag
gatatcttctcagagtgtgccaagcaggatgaaaaggggttaaagtctatggtggttcaa
ggagtgaagaatcctttggttgacctcctgtcattggaggacaaaacattagatgagggt
tatggagccagcgcaacaacaccctcaacttccagtgcaaacaggacagtgaaggagagc
agtaatgctgccatcataaagaggttcaaccatcacagtgccatggtgctggcagcaggc
tcacgaaaaggtgaaacaccaactgaccaagccagtgagacgagcagcacagatgggaac
tcgagggattctgacttattccagcctcctgtaaagaaggttagattacaagaagccatt
gagtatgaagatctgcaaagggaaaacagactaaaaacagttgcgttaaacctcaagaag
tctgacagatatgctcatggtcctgtgccacttcagtctcagcactatacaacaagccag
gatatcatcaactctgtcaactacatccggcatgagatggtcaattacaaacccaacctc
actcaggtgttgtccagcacagcggctagttctgccattacagcactttctccaggtggt
gtcctcatgatgacaggaacacagcaagccataaatcagatggtccccactgaggttcaa
ggagagttgaagcatctttatgcagcagcaggagagttgttgagacacttctggtcctgt
tttcctgtaaactcaccatttttggaggaaaaggtgatgaaaatgaagacaaacctggag
agatttcagatgaccaaactttgtccttttcaggagaagattcagcgtcagtacttgagt
acaaatctcacagggcatttggaggagatgttgcagacggcctatagcaagttccacatc
tggcaaacccggcgcatgttgaggaaaacctga
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