Acanthopagrus latus (yellowfin seabream): 119024404
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Entry
119024404 CDS
T08233
Symbol
caprin1b
Name
(RefSeq) caprin-1b isoform X1
KO
K18743
caprin-1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119024404 (caprin1b)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119024404 (caprin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
119024404
NCBI-ProteinID:
XP_036963080
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All DBs
Position
8:complement(12778033..12788409)
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AA seq
692 aa
AA seq
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MPSVMNANGPLQSVSPDVGSAPGSMGSLGQSEVLKQVLGVIDKKARNMEKKKSKLDDYQV
RKNSGERLNQDQLEALSKYQEIMNNLEFARELHKTFIAMGQDLQKVVKKSARREQLQREE
AEQRRLKTVLELQFLLDRLGEDTVRQDLKQGVGGSPLLTDADLAAFDEFYKLVGPDRDQN
IRLVDQYEEASLHLWDLLEGKDKAVVGTTYKALRETLDQVLLSGYFDRVPAHQNGVCEEE
EEEEAASAVATAAAAAAAAAVVVVAESSEAEEQTVDPETEIIEEFTEPIAVETTEFINRQ
FIPDSTYSGSEKEQGDEWTTETEAVSAMQQPPVQSAASPVAMETHPLNLVSPAPPSDPMA
RKQVVQDLMAQMQGTYNFMQDSMLEFDGQPIDPAIVSAQPMKPTQNMDLPQMVCPPVHPE
SRLSQPNTVPVQPEPTQVPIVSPTPPPMYQTSHTPDPRPPTESIDPIQASLSLSSEQPPP
STALPAASQTQVFQPVSKAPHSSGINVNAAPFQSMQTVFNLNAPVPPASETEALNQANQY
QNSYNQAFNSQSQHPVEQTEMQSEQLQSVVGAFHSQDQSGGHPQPSQQGPAFSRQPQSFY
NSRGMSRGGPRNARGMINGYRGSSNGFRGGYDGYRPPFANTPNSGYGPTQFNTPRDYSNG
NYQRDGYQQNYKRGAGQGPRGVSRGSTQAIRS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagtgatgaatgcaaatggacctctgcagtctgtcagcccagatgtgggatcc
gctccagggtcaatgggcagtcttggacagtccgaagtcttgaagcaagtgctgggtgtc
atcgataagaaggcccgcaacatggagaagaaaaagagcaaactggatgattatcaagtc
aggaagaatagcggggagcgtctcaatcaggaccagctggaggccctatccaaataccag
gaaatcatgaataacttggaatttgccagagagttgcacaagacgttcatcgcaatggga
caagatcttcagaaggtggtgaagaagtctgcgcgaagggagcagctacagcgggaggag
gcggagcagcggaggctcaagacggttctggagctgcagttccttctggaccggctggga
gaagacactgtgcggcaggacctgaagcagggagtgggcggctcaccacttctaacagat
gcagacctcgcagctttcgatgagttctacaagttagtggggccagaccgtgaccaaaac
atcaggttggttgaccagtatgaggaagcatctttgcacctctgggacctcctggaaggc
aaggacaaggctgtggttggaacaacatacaaggcactgagagagactttggaccaggtt
ctgctgagcgggtactttgaccgcgttccagctcaccaaaacggtgtgtgcgaggaggaa
gaagaggaagaggcagcctcagcagtggcaacagcagcagcagcagcagcagcagcagca
gtagtagtagtagctgaatcgtcagaagcagaagagcagactgttgatccagaaactgaa
ataattgaggagttcacagaacctattgcggtggaaacgacagagttcataaacagacag
ttcattccagacagcacttacagtggcagtgagaaggagcagggcgatgagtggaccaca
gaaacagaggcagtcagtgccatgcagcagccgcctgtgcagtctgcagcttcccctgtt
gccatggagacccaccccctgaacttggtgtctcctgcgcctccttctgaccccatggcc
aggaagcaggtggtgcaggacttgatggcacagatgcaaggaacatacaactttatgcag
gactctatgctggagtttgacggacagcccattgaccctgcaattgtctcggcgcaacct
atgaaacctactcagaacatggacttaccacagatggtgtgtcctccagttcacccagag
tcccggctatcacaacccaacactgttcctgtccaacctgagcccacacaagttcctatc
gtctctccaactccaccccccatgtatcagacctcacacacgccagatcctcgaccccca
acagaatcaatcgaccccatccaggcttccctgtccttgtcgtcggagcagccgccaccc
tctacagctctcccagctgcctctcaaacgcaggttttccagcctgtttccaaagctcct
cacagcagtggcatcaatgtcaacgcagcaccattccagtcaatgcagacagtgttcaac
ctcaatgccccagtcccaccggcaagtgagacagaggctttgaaccaggccaaccaatac
cagaacagctacaaccaagccttcaacagccagtcgcagcatcctgtggagcagacagag
atgcagtcagaacaactgcagtctgtagttggtgcctttcattcccaagaccagtcaggg
ggccatccgcagccttcgcagcagggcccagccttcagcaggcagcctcagtccttctac
aacagcagagggatgtctcgaggtggacctcgcaacgccaggggcatgatcaacggctac
agaggttcatcgaatggattcagaggtggctatgatggttatcgtcctccctttgccaac
actccaaactctggttatggaccgactcagttcaacacaccccgggattactcaaatgga
aattatcagagggatggttaccaacagaactacaagcgcggagctggtcagggacccaga
ggagtgtcaagaggcagcactcaggcaatacgatcctga
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