Acanthopagrus latus (yellowfin seabream): 119024438
Help
Entry
119024438 CDS
T08233
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03420
Nucleotide excision repair
alat04115
p53 signaling pathway
alat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119024438 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
119024438 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
119024438 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119024438 (ddb2)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119024438 (ddb2)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119024438 (ddb2)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119024438 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
119024438
NCBI-ProteinID:
XP_036963149
LinkDB
All DBs
Position
8:11411689..11487841
Genome browser
AA seq
492 aa
AA seq
DB search
MKRPTKSNASEPKGKVKKRAGESSATTLSRKLRDKKDGEKSKQGPPLKPAAVQKRTGYGS
ILHYIYKSTLGQSLHSRMRQCLQEPFVRSLSSYHFHGATSPFDRRITCLEWHPTHPTTLA
VGSKGGDLYLWDYETPTKQTFIQGNGAGDFIGGMRFCPTDLSKVYVASGEGTLTVQSFEG
HTPTVLSRTQDCGHDHHNVCYWYCCVDVSVSRQMLVTGDNVGELTLLGLDGQKIFKDKLH
KAKVTHAEFNLRCDWLLATASVDHTVKLWDLRNIKDKESFLHELPHDKAVNSAYFNPLDC
SKLLTTDQYDQIRVYSSSDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLVVAGRYPDDR
VCPGDQRTVDIYDANTAELVYQLQDPAAAGIKSVNKFNPMGEVIGTGMGVTVLVWDRNES
LLSDHPQQEETSTSADSLRGQRRSQQRSSRDRRGPAVDAKLKKKLASLEESGTKTKTKTG
CTKQKQAQTRKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaccgacgaagtcaaatgcctccgagccaaagggaaaagtgaagaaaagagcc
ggagagagctctgcgacgaccctctccagaaaactacgagacaagaaagatggagagaaa
tctaaacaagggcctcctctcaaacctgcagcagtccagaagaggactggctatgggagc
atcttgcattatatttacaagagcacactgggacaaagtctgcactcacggatgagacag
tgtctccaggaaccttttgtgcgctcactctcgtcctatcatttccacggtgccaccagc
cccttcgaccgcaggatcacctgcctggagtggcacccgactcatcccaccactctggct
gtgggctccaaaggcggcgacttgtacctgtgggactatgagacgcccacgaagcaaact
ttcatccaagggaacggagcaggagactttatcggagggatgaggttctgcccgacagac
ctttccaaagtctatgtggcttctggagagggcacactgaccgtgcagagctttgagggc
cacacacccaccgttctgtccagaactcaagactgtggccacgatcaccacaatgtctgt
tactggtactgctgtgtagatgtgtctgtaagccgacagatgctcgtgacaggagacaat
gtgggagagctcacactcctggggttggatggccaaaagattttcaaagacaagttgcac
aaagccaaagtgacccacgcagagttcaacttgcgctgtgattggttgctggcgacggcc
tcggttgaccacacagtgaaactttgggacctgagaaacatcaaagacaaggagagcttc
cttcatgagctgccacatgacaaagctgtcaactcagcctatttcaatccactggactgc
tccaagctgctcaccacagatcagtacgaccagatccgcgtttactcgtcttccgattgg
tcgaagcctcaacatatcatccagcatccacacagacagtttcagcatctcacacccatc
aaggccacatggcaccctgtctatgaccttgtcgtggcgggccgctaccctgatgaccgc
gtttgtcccggagatcagaggaccgtcgacatctatgacgccaacacagcggagcttgtg
tatcagctgcaagatcccgccgctgcagggatcaaatctgtcaataaattcaatccaatg
ggtgaagtgattggaactggaatgggtgtgacagtcctagtgtgggacagaaatgagtca
ttgctgagcgatcatccccaacaggaggaaacctccacctcagcagacagtctcagaggc
cagaggaggagtcagcagcgctccagccgggaccggagaggacctgctgtggatgcaaag
ctcaagaagaaactcgcttctctggaagaatcagggaccaaaaccaagaccaagactggg
tgtacaaaacaaaaacaggctcagacgaggaagaagtga
DBGET
integrated database retrieval system
