Acanthopagrus latus (yellowfin seabream): 119024611
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Entry
119024611 CDS
T08233
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119024611
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
119024611
NCBI-ProteinID:
XP_036963445
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Position
8:4840446..5024641
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AA seq
649 aa
AA seq
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MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLAVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTTVQQKVGP
TPSAGSSWESVSPTSTTTTTVRTPQSTRATEKTYTIPVTELGGESSLNGLDEVMKTTKII
IGCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLP
PLEHEHLNHYNAYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcttctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtgctgcttctggccctccagctgctggtggtagca
gggctggtacgtgctcagacgtgcccctctgtctgctcctgtagtaaccagttcagcaaa
gtcatctgcacccggcgaggcctgcgggatgtccccgatggcatctctaccaacacgcgc
tacctgaatctgcaagaaaatctcattcaggtcataaaggtggacagcttcaagcacctg
agacatcttgagatcctgcagctgagcaaaaaccacatacgcaaaatcgagctgggggcc
ttcaatggactggccagcctcaataccctggagctttttgataatcgcctcactactatc
ccaaacggggcgtttgagtacctgtccaagctaaaggagctttggctgaggaataacccc
atagagagcattccctcctatgctttcaacagagttccctcattgcggcggttggacctt
ggggagctcaaaaggctctcctacatttctgagggggcatttgaagggctgagcaatctg
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaactggagatgtcaggcaaccagttagctgtcatccggcctggctctttt
aaagggctcatccacttgcagaagctgtggatgatgcatgcccagatccagaccatagag
aggaactcttttgatgacctgcagtcactagtggagctcaatctggcccacaacaacctc
accctcttgccccatgatctcttcactcctttacatcacctcgagagggtacacttgcac
cacaacccgtggaattgtaactgtgacatcctctggctgagctggtggcttaaggagatg
gtaccagcgaacaccagctgctgcgctcgttgcagctcaccgacccaccataagggacga
tacattggcgagctggaccagaactactttcactgttatgctcctgttattgtggagcct
cccgccgacctaaatgtcacagagggaagcgctgcggagttaaaatgcagagccagctcc
ctgacctcggtaagctggattacacccaacggttccatcatgacacacggtgcatacaag
atcagaatctctgtgctgaatgacggcactctgaacttcaccaatgtcaccatgcaggac
acgggcacgtatacgtgcatggtcagtaattctgcaggtaacacgacagcatctgccacg
ctcaacgtgtcgtcaacggagaacagcagcttcagctacttcaccacagtgacagtggag
accatagaaacgccacacaatgaaggcttcaccactaccgtgcaacagaaggtgggcccc
accccctctgctgggagttcatgggagtccgtttcacccacctctacgactaccaccaca
gtccggaccccgcaatccacccgcgccacagagaagacttacacaatccctgtgacagag
ctgggtggggagagctcccttaacggcttggatgaggtgatgaagacgaccaagatcatc
atcggctgctttgttgcaatcacactcatggcagctgtcatgctgatcatcttctacaag
atgcgcaaacagcaccaccagcagaatcaccatgcacccacacgcaccattgagatcatc
aatgtggatgaggactgtgtaacaggaggcccgggcatggagggccacctgactctgcct
cctcttgagcacgagcacctcaaccactataacgcctataagactgcatacaaccatgcc
tccactatcaactccatacacagctcagcgcacgaacctttgttaatccgggccagctca
aaagacaatgtacaagagacccaaatctaa
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