Acanthopagrus latus (yellowfin seabream): 119024634
Help
Entry
119024634 CDS
T08233
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119024634 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119024634 (sf3b3)
03041 Spliceosome [BR:
alat03041
]
119024634 (sf3b3)
03036 Chromosome and associated proteins [BR:
alat03036
]
119024634 (sf3b3)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119024634 (sf3b3)
Spliceosome [BR:
alat03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119024634 (sf3b3)
Complex B
119024634 (sf3b3)
Complex C
U2 SnRNP specific factors
119024634 (sf3b3)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119024634 (sf3b3)
TFTC complex
119024634 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
119024634
NCBI-ProteinID:
XP_036963482
LinkDB
All DBs
Position
8:23650276..23679763
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLVSGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVSGIFTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVVVNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacatcaccctacagcgagccactggcatcactcatgccatccatggg
aacttctcaggaaccaagatgcaggagattgttgtttctaggggaaagatcttggaatta
ttgcggccagatgccaatacaggaaaggtgcacactctgctcacagtggaggtctttggc
atcgttaggtccctgatggccttcagactcactggaggaaccaaagactacattgttgtt
ggaagtgacagtggtcggatcgtcatcctagaatatcatccatccaaaaatatgtttgag
aagatccaccaggaaacatttgggaagagcggctgtcggcgcattgtccccggacagttc
ctggctgttgacccaaaaggcagagctgttatgataggagcgatagagaaacaaaagctg
gtttacatcctgaacagagatgcagctgcaaggctgaccatctcctctccactggaagcc
cataaagcaaacacactggtctatcatgtagtcggagtcgacgtcggctttgaaaatccc
atgttcgcctgcctagaaatggactacgaggaagctgacaatgacccgaccggagaagct
gccgctaacacacaacagacactcaccttttacgagctggacctgggcttgaatcacgtg
gtccgcaagtacagcgaggctttggaagagcatggaaatttccttatcactgtccctggt
ggttctgacgggcctagtggagttctgatctgctcggaaaactacatcacttataagaat
tttggagaccagcctgacatccgctgtcccatcccacgacgcaggaacgacctggatgac
ccagagcgtggtatgatatttgtctgctcagccacccacaagaccaagtcaatgttcttc
ttcctggcccagactgagcagggtgacatcttcaaggttactctggagacagatgaggaa
atggtcacggaaatcaggctgaaatactttgacaccatccctgtggcaacagccatgtgt
gtcctgaagactggcttcttgtttgtgtcttcagagtttggaaaccattacctttaccag
attgcgcacttgggtgacgatgacgaggagcctgagttctcctctgcaatgccgctggaa
gagggagacacgttcttcttccaaccccggcccctgaagaacctcgtgctggtggatgaa
caggaaaacttgtcccccataatgtcctgtcagattgctgatttggccaatgaagataca
ccacagttgtatgttgcttgtggacgaggaccccgatccactttgagggtcctcagacat
ggattggaggtgtcagagatggctgtgtctgagctgcccggtaaccccaacgctgtgtgg
acagtacgcagacatgttgaagatgagtttgatgcctacatcattgtgtctttcgtgaac
gctactctggtactttccatcggggagactgtagaggaagtgacagattctggatttctt
gggacgacacccactctctcctgctcactgctcggtgaagacgctctggttcaggtgtac
ccagacggtatccgccacatccgagcagacaagcgtgtaaacgagtggaagactcctggc
aaaaaaactattgttcgctgcgctgtgaaccagagacaggttgttatcgcactcacagga
ggggagcttgtctactttgagatggacccgtctggacagctgaatgagtacacagagcgg
aaggaaatgtctgcagacgtggtttgtatgagcctggctaatgttccacctggtgagcaa
cgctcgcgattcctggccgtgggactggttgacaacactgtccgaatcatctccctggat
ccttcggactgcctacagccgttgagtatgcaggcccttccagcccagccagagagtctg
tgtattgtcgagatgggaggggtcgagaaacaggatgaacttggagaaaagggaaccatc
ggcttcctctacctcaacataggacttcagaatggtgtgttgctgaggaccgtgcttgac
ccagtgacgggtgacctgtcagataccagaacacgctacttggggtcacgacctgtcaaa
ctcttcagagtccggatgcagggacaggaagctgtgttggcaatgtccagccgctcctgg
ctcagctactcgtaccagtctcgcttccacctgacccctctgtcatatgagactctggaa
tacgcctctggttttgcctccgagcaatgtcctgagggcatcgtggccatttccaccaac
acactgagaatcttggctttggagaaattgggagccgtcttcaatcaggtggcctttcct
ctgcagtacactcccaggaaatttgtaatccacccagagacgaacaaccttattttgatc
gagaccgaccacaatgcctacactgaggcaaccaaagctcagagaaagcaacagatggct
gaggagatggtagaggctgctggtgaggatgaaagagagctagctgctgagatggctgcc
gcattcctgaacgagaatctcccagaagccatttttggtgcccctaaagccggggcagga
cagtgggcctcactggtgcgtctcgtcaaccccatacagggttcaacactggatcaggtg
cagctggaacagaacgaagctgcattcagtgtcgccgtgtgccgtttccccaacacagga
gatgattggtatgttctggtgggtgttgccagggatatgattctcaacccaagatcagtg
ggtggtggctttatctacacctatcgactcgtcagtggaggggagaagctggagtttgtg
cacaagactccagtcgaggacgtccctttggccatcgctcctttccagggacgagtgctg
gtgggagttgggaaactgctgagaatctatgacctgggcaaaaagaagctgcttcgcaag
tgtgaaaacaagcatgttcccaacctggtgagtggcatctttaccatcggccagcgtgtg
atcgtgtctgacgttcaggagagcctgttttgggtccgttacagacgcaacgagaaccag
ctcatcatctttgctgacgacacgtatccccgctgggtgaccacagcctgtctgctggac
tacgacactatggcctctgctgacaagtttggtaacatcagcattgtccgtctgcccccc
aacaccagcgatgatgtggatgaagaccccacagggaacaaagcattatgggacagaggc
ctcctcaatggagcctctcagaaggctgaggtggtagtgaattaccatataggagagacg
gtgttatctctccagaaaaccactctgatccctggaggatcggagtccctggtctacacc
actctgtctggaggcatcggcattctggtcccattcacctcacatgaggaccatgacttc
ttccagcatttagagatgcatatgcgctctgagttccctccactgtgcggcagagatcat
ctcagctttagatcctattacttcccagtcaagaatgttattgatggagatctgtgtgag
cagtttaacagtatggaccctcacaagcagaaaagtgtggcagaagagctggacagaacg
cctcccgaggtctccaagaaactggaggacattcgcactcgctatgccttctaa
DBGET
integrated database retrieval system
