Acanthopagrus latus (yellowfin seabream): 119024716
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Entry
119024716 CDS
T08233
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119024716 (ppfibp1b)
Membrane trafficking [BR:
alat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119024716 (ppfibp1b)
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
PUMA_CC
DUF16
WHEP-TRS
FlaF
BCNT
Motif
Other DBs
NCBI-GeneID:
119024716
NCBI-ProteinID:
XP_036963630
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All DBs
Position
8:6057214..6079650
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AA seq
965 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKALDYSNGMFDCQSPTSPFMGSLRALHLLEDLRNVLE
VMDTEERESLRCQIPDSTADSLVEWLHGHLSNGHISLSGGDHYQERLSRLESDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLDEHRDKLNATEEMLQQELLCRTALETQKLELMSEVSNL
KLKLNTMDKDGLDFDRFRDSEDLILEMNELRYRLTDLEGEKLQYEKKLKSTKEELAILRR
QLEGKDGEMRRLQDETGFKGVASSSADPTERVSHQDETLRKRLKEKHVEVQRMKKAVESL
MAANEEKDRKIEELKQSLLRYKKVQDMVMSVQGKKEKTKDDEHVEIHSDGSITFSPVVSV
ELHNHEVTDAEQLPRKSPDELESLNGMMEEPSPTPSPLDPERLSETAPTDVESSQDATKT
GSQDQLDRSNNEKNTSEEIIKISEKPPICPTATLPANLPATTEDESFGSRKARSSFGKGF
FKIRGGKKTNSTPNLDRSRSASAPMLAETERQGTDHLDLAGMPQRSTNSDSTHTLPTTPE
GKKKSKGIKKLFGKLKRSQSTTFNLDDNLPEGEFKRGGVRATAGPRLGWSRDLQRVNNEV
DAPFARWSKDQVCDWLQGQGLGLYVNMARVWISSGQTLLQASQQDLERELGIKHPLHRKK
LQLALQALGSEEEDNKGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLS
LKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNISPAEISQWTNHRVMEWLRSVD
LAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLIGSEAQQ
LKQECLENPDYTLLTATTKVKPRKLSFGNFGSLRKKKQDENEEYVCPMDVEMPKGRSFQK
GFELQIYEDDLDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTD
EDSNA
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgatgccagcgacatgttggcagctgctctggagcagatggacggcattata
gcaggctccaaggctctggattactctaatgggatgtttgactgccagtcgcccacctct
cctttcatgggcagcctgagggcccttcaccttttggaagacctgaggaatgtcctggag
gtaatggacacagaagaaagggaaagtctacgctgccagatccccgactccacagctgac
agtctggtcgagtggctccatggtcacctgtctaatgggcacatctctctgagtggggga
gaccactaccaggagaggctttcccgactagagagtgacaaggagtctctggttcttcag
gtgagtgtgctgactgaccaggtggaggcacagggggagaagattcgagacctggacttg
tgtttggacgagcacagggataaactcaacgccactgaggagatgctgcaacaggagctt
ctctgcagaactgcgctggagacgcagaagctcgaactgatgtctgaagtgtccaaccta
aagctgaagctgaacaccatggataaggacggactggactttgacagatttagggacagt
gaggatctgattcttgaaatgaacgaactgcggtacagactgacagatctggagggtgaa
aaactacagtacgaaaagaaacttaaatccacaaaggaggagctagccatactgaggagg
cagctggagggcaaagacggagagatgaggaggctacaggatgagacaggcttcaaaggc
gtcgcctcgagcagtgcagatcccacagagagagtctctcatcaagatgaaactcttaga
aagaggctgaaagaaaaacatgtggaagtgcagagaatgaaaaaggcagttgaatcgttg
atggcagccaatgaggagaaggatcgtaagattgaggagctgaagcagtcgctgctgcgg
tacaagaaagttcaagacatggtgatgtcagtgcaaggaaagaaagagaaaaccaaagat
gacgagcatgtcgagattcacagtgatggttccatcacattctcgcctgtcgtgtcagtg
gagctgcacaatcatgaagtgacagatgctgaacaactgccaagaaaaagcccagacgag
ttggaaagcctcaatggaatgatggaagaaccttcacccacaccgagccctttagatcca
gaacgactgtcggagactgcaccgacagacgtagaaagcagccaagatgccacaaagact
ggcagccaggaccagctggataggagcaataatgaaaagaatacaagtgaagaaatcatt
aagatcagtgaaaagccccccatctgtcccactgccaccttgcctgccaacctgcctgcc
accacggaagacgaaagctttggctcgagaaaggctcgttcatcttttggaaagggcttc
ttcaagatccgagggggcaagaagacaaacagcacacctaacctggaccgcagccggagt
gcaagtgcgcctatgctagctgaaacagaacgacaaggtaccgatcatctggatttggcc
gggatgccacagaggtcgactaatagcgacagcacccacacactcccgacaaccccagag
ggcaagaagaaatccaaaggaataaagaaactgtttgggaagttaaaaaggagtcaatct
accacatttaacctggacgacaacctgccagagggtgagttcaagagagggggagtgcga
gccacagcgggacccagactgggttggtctcgtgacctccagagagtcaacaatgaagtt
gacgctccctttgcacgctggtcaaaggatcaggtgtgtgactggctgcagggccagggg
ctcggcctttatgtgaacatggctcgtgtgtggatctcttcgggtcagacgcttctacag
gcctcacaacaggacctggagagggagctgggaatcaaacacccgctgcacagaaagaag
ctgcagctggctctgcaggccctcggctcagaggaggaggacaataagggaaagctcgac
ttcaactgggtgacgagatggctggacgacatcggcctgcctcagtataagacccagttt
gatgaggggagggtggatggtcgcatgctgcactacatgacagtggatgacctgctttct
ctaaaagtcgggagcgtcctgcatcacctcagtatcaagagagccatccaagtgctccga
ctcaacaactatgaacccaactgtttgcgtcgtaggccgtctgatgagaacaatatttct
ccagcagagatttcccagtggaccaaccatagggtgatggagtggctgcggtctgtggac
ctcgctgaatacgctcccaacctgagaggcagcggtgtgcacggaggcctgatggttcta
gagccgcggttcaacgtagagaccatggctttgctgctgaacatcccccccaacaagacg
ctgctgcgccgccacctcgccacacatttcaacctgctcattggctcagaggctcagcag
ctcaaacaagagtgtcttgaaaatccagactacactctgcttacagccaccacaaaggtc
aagccgaggaaactgtcatttggaaactttggcagcctgaggaagaaaaagcaggatgag
aatgaggagtacgtgtgtccgatggacgtggagatgccaaagggacgaagctttcagaaa
ggcttcgagctccaaatctacgaggacgacctcgacaggctcgaacagatggaggactct
gagggaactgtgagacagattggagctttctctgagggcattcaaaacctgactagcatg
ctgaaagatgacgaattcttcaaagagatttcaaattcaccgaaccccagtgtaacagac
gaggactccaacgcatga
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