Acanthopagrus latus (yellowfin seabream): 119024721
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Entry
119024721 CDS
T08233
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04115
p53 signaling pathway
alat04120
Ubiquitin mediated proteolysis
alat04137
Mitophagy - animal
alat04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119024721 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119024721 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119024721 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
119024721 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119024721 (siah1)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119024721 (siah1)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119024721 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
119024721
NCBI-ProteinID:
XP_036963654
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All DBs
Position
8:complement(23778926..23805856)
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AA seq
286 aa
AA seq
DB search
MDEEMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatgagtcgccagactgccaccgcgctgcccacaggaacctccaagtgt
cccccctcacagcgcgtgcccaccctgtcaggcaccaccgcctccaacagtgacctggca
agcctgttcgagtgccctgtctgcttcgactatgtcctaccccccatcctgcagtgccag
tccggacacctggtatgctccaactgtcggcccaagctcacctgctgccccacctgccga
ggaccactgggctccatcaggaacctagccatggagaaggtggctaactcagtcctcttc
ccctgcaagtatgcttcatcgggctgcgaagtcaccctgccacacactgacaagacagag
catgaagagctgtgtgagttccggccgtactcctgcccgtgccccggcgcctcctgcaag
tggcagggctccttggacgctgtcatgcctcacctgatgcaccagcacaagtccatcacc
acactgcagggggaggacattgtgttcctggccacagatatcaacctgccgggcgcggtg
gactgggtaatgatgcagtcgtgcttcggcttccacttcatgctggtgctggagaagcag
gagaagtacgatggccaccagcagttcttcgccatcgtgcagctcatcgggactcgcaag
caggccgagaacttcgcctacaggctggaactcaacggacatcggcgccgcctgacctgg
gaggccacgccacgctcgatccacgagggcatcgccacggccatcatgaacagcgactgc
ctggtgttcgacacgtccatcgcacagctattcgccgagaacggcaacctggggatcaac
gtcaccatctccatgtgctaa
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