Acanthopagrus latus (yellowfin seabream): 119024800
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Entry
119024800 CDS
T08233
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119024800 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119024800 (lamb1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
wHTH_TTC3
Motif
Other DBs
NCBI-GeneID:
119024800
NCBI-ProteinID:
XP_036963808
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Position
8:complement(7162..33852)
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AA seq
1799 aa
AA seq
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MLELQFAVLLTLQVFTCAQEGGVSVGGAQDDVSLPELSDVCTEGSCYPATGDLLIGRAHQ
LSSTSTCGLKLPEPFCIVSHLQEEKKCFMCDSTVPYEERSDQTSGHRIENVVTTFAPNRL
KTWWQSENGFENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAY
DCETSFPSVSQGPMHKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFKIDDPYSPRIQNML
KITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVQGTGL
TREGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDI
AVFMASGNVSGGVCDDCRHNSAGHNCEQCKPFYYQHPEKDVRDPNICQPCNCDPLGSLNG
GICDGLTDVRAGLIAGQCRCKVNVEGERCERCKEAHYGLSDTPEGCRACTCSPVGTLPGG
NPCDSETGSCFCKRLVTGRDCDQCVPEHWGLSNDMDGCRPCDCDLGGALNNQCDQVSGQC
VCRDHMFSRRCDQVESGFYFIALDHYTYEAEEAKFGPGVTVVPRPHPLDRSPTWTGIGLV
SVPEGAFLEFTVDNIPHSMEYNILIRYEPQLPDQWEEVLMTLMRPGPIRADSRCVNTVPD
DDNQMISLHPGSRYVVLPRAVCFESGLNYTVRLSLPLYSPLSDVQSPYTLIDSIVLMPHC
KNLEIFTASEGGDSSGNSGWDTFQRYRCLENSQSVIKSQMTDICRNFIFSISAMLHQGAK
ECQCDPQGSLSTVCDPSGGQCQCRPNVVGRSCDRCAPATFHFGPNGCRACACDPQGSHSS
FCDQLTGQCVCVSGAYGRQCDRCLPGHWGFPTCRPCTCNGHTDECDPNTGRCINCRDHST
GHTCDRCLDGYYGDPVLGSGDHCRPCMCPDGPGSLRQFAASCYRGDDSQQAICVCNTGYK
GARCDECSPGYHGNPGEVGGTCQPCQCNNNIDMLDPESCDSRTGECLRCLYHSEGAACQS
CKLGYYGNAMLQDCRKCVCNQLGSDPSSCPSSGDCHCDGSSGQCHCLPNVVGQHCDRCAP
DTWNMASGRGCQTCDCDPKHSYGTSCNEISGQCSCQPGFGGRTCSECRELFWGDPEVKCH
ACDCDPRGTSEPQCKKASGHCICVDGVSGPHCDVCARGFSGTFPDCSHCHQCFAEWDQVI
GQLTNQTHRLVNKVNAIKASGVSGPYRNSMDSMERSITDIRAVLNQNPASQPLTDIQELL
QQASDLMGALSQSLNHTEQTLVQVEDLDSAAHTKLDSVKSDAEKLERTVHELLDHVEFIK
NSDIRGATDSVTKYFLQSQAAEVRVNASTIDPDSPVETSHILRQLTEHKMNESREEFLRR
HSEHAQRLDDLAGELQTLDLSDLSHKTCGSPSLGQDLCLSSPCGGLGCVDSEGQTRCGGE
GCDGVVTAASNTWRKARDSEQEIMSAMEEVEKLSKMVFEAKLKADEAKQSAQDVLMKTNQ
TKQKLEQSNEELRSLIRQIRDFLTQDAADLESIELVANEVLAMHMPTTPAQLQNLTEEIR
QKVAELGGVETILQQSAGDIKRAENLLYQARQASKEAADVKESAEKVKQALKEAQRAQTA
ASSAIQQATTDIRNTNNLLSSVESETADTELKLNNATQRLQQLEKDVMLLRDKAVNITQS
TEQTNQDAVSIEKIAEEVKKDMESELKDKYSTVEQLIEQKAGGVADAKKRAELLQQEAKD
LLLKASDKLQLLKDLEKSYEDNQRTLEMKVEKLVELEAAVKVLLQDISHKVTIYSTCLF
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcttcagtttgcggtgctgctcactctgcaggtgtttacctgtgctcaggag
ggtggggtgtcagtgggtggggcccaagatgacgtcagcctcccagagctcagtgacgtg
tgcacagagggcagctgttacccggcaacaggagaccttctgattggccgagcccatcaa
ctgtcatctacttctacctgtggactgaagctacctgaaccattctgcatcgtcagccac
ctccaggaggagaagaagtgtttcatgtgtgactcaacagtgccatatgaggagcgttca
gatcagacgagtggtcatcgtatcgagaatgttgtcaccacatttgctccaaacagactg
aagacctggtggcagtctgagaacggttttgaaaatgttaccatccagctaaacctggag
gcagagtttcacttcacacatcttatcatgaccttcaagacgtttcgacctgctgctatg
gtgattgagcgatcagctgatttcgggaagaactggcaggtttatcgttacttcgcctac
gactgcgagacctctttcccgtctgtttcccagggtccaatgcacaaagtcgacgatgtc
atctgtgactcacgttactctgatatcgagccatccactgaaggagaggtgattttcaga
gttctggacccagcattcaagattgatgatccctacagtcccagaatccagaacatgttg
aaaatcaccaacctgcgggtgaagttcaccaaacttcatacactcggagacaacctgctg
gactctcgtatggagatcaaagagaagtattactatgccatctacgacatggtggtccga
ggaaactgcttctgctatggacacgcctctgagtgcgcccccgtccagggaaccgggctg
accagagagggcatggttcacggtcactgcatgtgtaaccacaacactaaaggtctgaac
tgtgaacagtgtcaggacttctaccatgacctgccgtggagaccagccgagggacgcaac
accaatgcctgcaagaaatgcaactgtaaccagcactcagactcgtgtcacttcgacata
gccgtgttcatggcttcaggaaacgtcagcggaggagtttgtgacgactgtcgtcataac
agcgccggacacaactgtgaacagtgtaaaccattttactaccaacatccagagaaagat
gtcagagatcccaacatctgccaaccctgtaactgtgacccactgggctctctgaacgga
ggaatctgtgacggtctgacggatgttcgagccggtctgattgctggtcagtgtcgctgt
aaagtcaacgtggagggagaacgctgcgagcgctgcaaagaggcacactacgggctgagt
gacacgcccgaaggctgcagggcctgtacctgcagtcctgtgggaacacttcctggagga
aatccatgcgacagtgaaacaggaagttgtttctgtaaacgtctggtgactggaagagac
tgtgatcagtgtgtgccagagcactggggtctcagtaacgacatggacggctgtagacca
tgtgactgtgacctgggaggagccttaaacaaccagtgtgatcaggtgagcggtcagtgc
gtatgcagagatcacatgttcagtcgtcgctgtgaccaggttgagtctggattctacttt
atcgctctggatcattacacgtatgaagccgaggaggccaagtttggacctggagtgacc
gtagtcccgaggccccaccctctggaccgcagccccacctggacaggtatcggtctggtc
agcgtcccagagggggcgtttctcgagttcactgtggacaacatcccccactctatggag
tataacatcctcatccgctacgagcctcagctgcctgaccaatgggaggaggttctgatg
acactgatgaggcctggaccaatcagagcagacagtcgttgtgtcaacactgtgccggac
gatgacaaccagatgatctcacttcatcctggctcacggtacgtggtccttcccagagcg
gtttgttttgaatctggtcttaactacacagttcgcctcagtctgccgctctactcgcct
ctcagtgacgtccagtctccatacacactcattgactcgattgtgttgatgcctcactgt
aagaatctggagatcttcacagcctcagagggaggagactccagcgggaacagcggctgg
gacacttttcagcgttatcgttgtttggaaaacagtcagagtgtcatcaaatctcagatg
accgacatctgcagaaactttatcttcagcatctctgccatgttgcaccagggagctaaa
gaatgccagtgtgaccctcaaggctccctcagcacagtgtgtgaccccagcggcggtcag
tgtcagtgtcgcccaaatgttgtcggcaggagctgcgacaggtgcgctccagcaacattc
cattttggacccaacggctgcagagcgtgtgcttgcgaccctcagggttcacacagttca
ttttgcgatcagctgaccggtcagtgtgtgtgcgtatctggagcatatggccggcagtgt
gaccgttgtctgcccggtcactggggcttccctacctgccgaccttgcacttgtaacgga
cacactgacgagtgcgaccccaataccggacgatgcattaactgccgggaccacagcact
ggacacacctgtgataggtgtctggacggttactatggtgatccagtgcttgggtcaggt
gaccactgtcgtccctgtatgtgtcctgacggccctggcagcctgcggcagttcgcagcg
agttgttaccgtggtgacgactcccagcaagccatctgcgtctgcaacactggatacaaa
ggtgctcgctgtgatgagtgctcacctggttaccatggaaaccccggggaagtgggtggg
acatgtcagccctgtcagtgcaataacaacatcgacatgttggacccggagtcctgtgac
agccgaactggcgaatgtctgcgctgtctttatcacagcgagggtgccgcttgccagagc
tgcaagctgggttattacggcaacgccatgctgcaagactgcaggaagtgtgtttgtaac
cagctcggcagcgatccctccagctgtccatcatctggcgactgtcactgcgatggcagc
agtggtcagtgtcactgccttcccaatgtagttggtcaacactgcgaccgctgtgcgccc
gacacttggaacatggcgagtggtcgcggctgtcagacctgtgactgcgaccccaaacac
tcgtatgggacatcctgcaacgagatcagtggtcagtgttcctgtcagcccggcttcgga
ggaagaacatgcagcgagtgtcgagagctattctggggagacccagaggtcaaatgtcac
gcatgtgactgtgaccctcgcggtacctccgagccgcaatgtaagaaagccagcggccac
tgcatctgcgtggatggcgtttctggtccacactgcgatgtctgtgctcgcggattctcc
gggaccttccctgactgtagccactgccaccagtgttttgctgagtgggaccaggtcatc
ggtcagctgaccaatcagactcaccgtcttgtcaacaaggtcaatgccatcaaagccagc
ggagtcagcggaccatacaggaattccatggacagcatggagaggagcatcaccgacatc
cgggccgtcctcaaccagaacccagcctcgcaaccactgaccgatatccaggagctgctg
caacaggccagtgacctgatgggggctctgagtcagtcattgaaccacactgaacagact
ctggtccaggtggaagacttggactcggccgctcatactaaactagactctgtgaagtcg
gatgctgagaaactggagcgtacggttcacgagctgctggatcatgttgagttcatcaag
aattctgacatcagaggggcaacggacagcgtcactaagtacttcctgcagtctcaggca
gctgaagttcgagtgaatgcctccaccatcgaccccgacagccctgtggaaacctcccac
attctgcggcaactgactgagcacaaaatgaatgaaagcagagaggagttcctgaggaga
cacagtgagcatgctcagagactggacgacctggcaggagagctgcaaactctggaccta
tcagacctcagccacaagacatgtggcagtccatctttaggtcaggacttgtgcttgtcc
tctccctgtggtggtcttggctgtgtggactctgagggtcagaccagatgtggaggtgaa
ggatgtgatggcgtggtgactgcagccagcaacacctggaggaaagcccgagactctgaa
caggaaatcatgagtgccatggaggaagtggaaaaactctccaagatggtttttgaagcc
aaactgaaagcagacgaggcaaagcagagtgctcaggatgtcctgatgaagaccaaccaa
accaaacagaaactggagcagagcaacgaggagctgagaagtctcatcagacagatcaga
gacttcctcacacaggacgctgccgacctggagagcatcgagctagtagctaatgaggtt
ctggccatgcatatgccgaccacgcctgctcagctgcagaacttaacggaggagatccga
cagaaggttgctgaactgggaggcgtggagaccatcctgcagcagagtgctggtgacatc
aagagagccgagaaccttctctaccaggcccgccaagctagtaaggaggcggcagatgtg
aaggaatctgcagagaaggtgaagcaagcacttaaagaagctcagcgagctcagaccgct
gccagtagcgctatccagcaggccaccactgacatccggaacaccaacaacttgctctcc
tctgtggagtcagagacagcagatacagagttgaagctaaataacgctacccagaggctg
cagcagctggagaaggatgtgatgctgctgagagacaaagctgttaacattacccagagc
actgaacagactaatcaggatgcagtgagcattgaaaaaattgcagaggaggtcaagaag
gacatggagtctgagctgaaggataagtacagcacagtggagcagctgattgagcaaaag
gcagggggcgtggcagatgcaaagaagagggcggagttacttcagcaggaagccaaagac
ttgctgctgaaggccagtgacaaactgcagctcctcaaagatctggagaagtcttatgaa
gacaaccaacgaactttggagatgaaggtggagaagctggtggagttggaagccgccgtg
aaggtgctgctgcaagatatcagccacaaggtcaccatctacagcacctgtctgttctag
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integrated database retrieval system
