Acanthopagrus latus (yellowfin seabream): 119024810
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Entry
119024810 CDS
T08233
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119024810 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119024810 (myo5c)
04131 Membrane trafficking [BR:
alat04131
]
119024810 (myo5c)
03029 Mitochondrial biogenesis [BR:
alat03029
]
119024810 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alat04812
]
119024810 (myo5c)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119024810 (myo5c)
mRNA cycle factors
P-body specific factors
119024810 (myo5c)
Membrane trafficking [BR:
alat04131
]
Others
Actin-binding proteins
Myosins
119024810 (myo5c)
Mitochondrial biogenesis [BR:
alat03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119024810 (myo5c)
Cytoskeleton proteins [BR:
alat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119024810 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_16
AAA_22
Ac76
Motif
Other DBs
NCBI-GeneID:
119024810
NCBI-ProteinID:
XP_036963820
EnsemblRapid:
ENSALTG00010027042
LinkDB
All DBs
Position
8:complement(12243487..12256523)
Genome browser
AA seq
1742 aa
AA seq
DB search
MALLELYTEYNRVWIPDAEHVWKSAEIMRDFHSGDNVLELLLEGGTEHYYPVDPLKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSNTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKKYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQLCSCAQLPEFKHLRLLSADKFQYTCMGGEITIEGVD
DKKDMEETRRTFSLLGLKEDFQSDVFKVLAAILHLGNVEIKSSGGDKSSVPSGDPHLAVF
CELLKVSAVELVRWLCHRRIVLVAETVVKPVPKKRAVNARDALAKQIYAHLFDCIINRIN
TALKVPAKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLEPNPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDALYEELVDIMRDSKFPFLAHFFQEEERNAAN
SKGVKVRPARPAVKQANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNEEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMTHQEADQSDKKQTCKNV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSRRRKFLRMR
QAAIIIQEYIRGKRTVRKTVTAATLKQGWASVVIQRHWRGYRMRQVYQVVRLASVTIQAF
TRGWMARKRFKKMMKEQKALVLQKYARAWLARRRFQTMRRLVLNVQLSYRVQQLRKKIEE
QSKENRGLMERLTSVANSHSQSVDRLQVLEAQLEKVNSQKESLEAREKKAKEDASLTIAK
LQKEADALNVEKQNLEKQFEASTKEAKESFDQIKRSLVEEKDYEARLRKIAENNIEIQRQ
DHEKEVETLKEEIKRLKEERVGLQRKVEENVRTNSDLQEQVIQLSKHVKVIPELRRDLNN
LQNQRNSMDRKVKQQSEQARVKMNDITRQLLGGVVEEDVLLGLNPDNSEKIYEMEDLLEA
FDGLQKATRILQNHQREQKESYETQVEGFKLKVDHLQNENTELQKLFQEKSNINEDIRQE
VSRLSSENSVIPELKLQVSELQRQKQELEAHVEEQSRELAEKTEEITDVLQRKIEEESSQ
RRHFEGKAEELEELKGELRGQIEELEEENDHLKRQQLMDSEAKIKLRQEISRLTAENMDI
EELLDQKDRLIKKLLNQIKSLEVSQKAGKPSAPAMPKDYLGMLECKREDEPRLIQNIILD
LKPRGVVVGMIPVLPAYIIFMCVRHADYLNDEGKLKSLMNEVIKAIKKVIMSYQKDFELL
SFWLSNIYQLLNCLKQYSGEEEFMKQSTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQFI
SVMEKSLTPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETYTISSIIQQLSVFHS
TMSQHGMEQGLVKQAVKQLFFLVGATTFNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAIDTLRPLSQAAWLLQVNKSTDDDAKEISDKCTELNSVQIVKILNSYTPIDDFE
KRVSSSFVRKVQSLLQDRDGSSQLMLDSDYRFQVTFPFCSSPQALELMQVPSSLHLSFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggagctgtacaccgagtacaacagagtgtggataccagatgcagagcat
gtctggaagtcagccgagattatgagagactttcactctggggacaatgttctcgagctg
ctccttgaaggtggcactgaacactactaccctgttgacccattaaagccacaactccct
cctcttcgcaacccggacatcttggtgggggagaatgacctcaccgctctcagctacctg
cacgaacctgcagtcctgcataatctcaaagtgcgatttgtggagtccagaatcatctat
acttactgtggtattatactggtggctgtaaatccatacaaacagcttcatatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaatcaatccatcatc
gtcagtggggaatctggggccggtaaaacagtgtctgctcgatacgctatgaggtacttc
gctgtcgtgagcaaatctggaagtaacactcgagttgaagacaaagtcctggcgtccaat
ccgataacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgcttt
gggaaatacacagagatcagctttgacaagaagtaccggatcatcggagcgaacatgagg
acgtatctcttagagaaatccagagtcgtttttcaggcagacaacgagcgaaactatcac
atattctaccagctgtgttcctgtgctcagctgcctgagttcaagcatctgagactgttg
agtgcagataagttccagtacacctgcatgggcggtgagatcactattgaaggtgtagat
gacaagaaagacatggaagagactcgacggaccttctcactgctggggttgaaggaggac
ttccagtcggatgtgttcaaagtcttggcggccattttgcatttgggaaatgtggaaatc
aaaagttctggaggtgataaatcatcagttccttccggtgatccacacctggcggtcttc
tgtgagctgctgaaggtgagcgctgtagagttggtgcgttggctgtgtcatcggaggatc
gtcctggtggcggagacggtggtgaagccggtgcccaagaagcgggcagtgaatgccaga
gacgcactcgccaagcagatctacgcccacctgtttgactgtattattaacagaataaac
acggcactgaaggttccagcaaagcaacacgctttcataggtgttctggacatttatggc
tttgaaacgttcgacatcaacagctttgaacagttttgtatcaactatgcaaatgagaag
cttcaacagcagtttaacttgcatgtgttcaagctggagcaggaggagtacatgaaggag
gacatcccatggacgctgatagatttctatgacaatcagccggtcatcgacctgattgaa
gcgaagatggggatccttgacttgcttgatgaagaatgtctgtttcctcagggcactgac
caaagctggctgcaaaagcttttcaactacctcgagcccaaccctctgtttgagaagccc
aggttatcaaatgaggcatttgtgattcagcactttgcagacaaggtggaatatcaatgc
agaggtttccttgaaaagaacagagacgctctgtatgaagaactggttgacataatgaga
gacagtaagtttccttttctggcccactttttccaagaggaggagcgaaatgctgccaac
agcaaaggtgtcaaagtgaggcctgccaggccggcagtgaagcaagccaataaacagctg
agaacctctgtgggagataagttctgcagctccctctctttactgatggaaacactgaat
gctaccacccctcactatgtgcgctgcattaagcccaatgaggagaagctcccatttgaa
tatgactcccggagggtggtgcagcagctacgagcctgcggagtccttgaaacgattcgt
atcagtgcccagagctatccgtccaggtggacctacatcgagttttacagcagatacagt
atcctgatgacacatcaggaggccgatcagagcgacaagaaacagacctgcaagaacgtg
ctgcagaggttgattcaggacccaaaccagtacaagtttggtcggaccaagatcttcttt
cgagctgggcaggtagcgtatctggagaagctgcgcctggaccggctgagaggagcctgc
gtgaccatccagaaacacgtccgcgggtggagcaggaggaggaagttcctgcgcatgaga
caggcggccatcatcatccaggagtacatccgtggaaagaggacagtccgtaaaacagtg
actgctgctacactgaagcagggctgggcgtcagtggtgatccagagacactggagaggt
taccgcatgagacaggtctatcaggtggtccgtctggcctccgtcaccatccaggccttc
acacgaggttggatggcccgtaaacggttcaagaagatgatgaaagagcaaaaagccctg
gttctacagaagtacgccagagcgtggctggcacggcgacgatttcagacaatgcgtcgg
ctggtgcttaacgtccagctctcctacagggtgcagcagctcaggaagaagattgaggag
cagagcaaagagaaccgtggactgatggaaagactgacaagcgtggccaactcgcactcc
caatctgtggacaggcttcaagtgttggaggcacagctggagaaagtgaacagccagaag
gagtctttggaggcgagagagaagaaagcgaaagaagacgccagtctgacaattgcaaag
cttcaaaaggaagcagatgcactaaacgttgaaaaacagaatttagagaaacagtttgaa
gcttccaccaaagaggccaaagagagctttgatcaaataaagaggagtcttgtggaagag
aaagactacgaagcaagactcaggaaaatcgcagagaacaacattgagatccagagacag
gaccacgagaaggaggtggaaaccctgaaagaggagataaagagactgaaggaggagaga
gtcggtctgcagaggaaggtagaggagaacgtgcggacgaactctgacctgcaggagcag
gtcatccagctcagcaaacatgtcaaggtcatccccgagctgcgcagagacctcaacaac
ctccagaatcagaggaacagcatggaccggaaggtgaaacaacagtcggaacaagccaga
gttaaaatgaacgatattacgagacaacttcttgggggtgttgttgaagaggacgttctc
ttgggcttaaatccagacaactctgagaagatttatgaaatggaagatttgcttgaagcc
tttgatggcctacagaaagctaccagaattctgcaaaaccaccagagggagcagaaggaa
agctatgagacccaggtggagggctttaaattgaaagtggaccaccttcaaaatgaaaac
accgagcttcaaaagttgttccaggagaaaagtaacatcaatgaagatattcgccaagag
gtgtccaggctcagcagtgagaactcagttataccggagctcaaactgcaggtttcagag
ctgcagagacaaaaacaagaattggaggcccatgtcgaagagcagagcagagaactagca
gaaaaaactgaagagatcaccgacgtccttcaaaggaagattgaagaagagagctcacag
cgcagacactttgaggggaaagctgaggagctggaggagctgaagggggagctacggggc
caaatagaagagctggaagaggagaacgatcacttgaagcgacagcagctgatggacagc
gaggcgaagattaaactgagacaggagatttcacgactgactgctgagaatatggacatt
gaagagctcctcgaccagaaagacagattgataaagaagctcctgaatcaaataaagagc
cttgaagtgtcacagaaagcggggaagccgtctgcacccgccatgcccaaagattacctc
ggcatgttggagtgcaagagggaggatgaaccgaggctcattcaaaacatcattctggac
ttgaagcccagaggcgtggtggtcggtatgattccagttctgccagcatacatcatcttc
atgtgcgtccgccatgccgactacctgaacgatgaaggcaaactcaagtctctgatgaac
gaagttatcaaagctatcaaaaaagtcatcatgagttaccagaaagactttgagttgctg
tcgttctggctctcgaacatctatcagctgctcaactgtctgaagcagtacagcggggag
gaggagttcatgaaacaaagcactccccgccagaagaagaactgcctgcagaatttcgat
ttgtccgaacacagacagattctcagcgacctggccatccacatctaccatcagttcatc
tccgtcatggagaagagcctcactcctgccattgtacccggcatgttggagcacgagagc
ttacaggggatctcaagcatgaagccgacgggcttcaggaagcgctccaacagcatctac
gaggactcagagacgtacaccatctcctccatcattcagcagctcagtgtcttccactcc
accatgagccagcacggcatggagcaaggcctcgtcaaacaggccgtgaagcagctcttc
ttcctggtcggtgcgaccaccttcaacaacatcatgctccgcaaagacatgtgttcctgc
aggaaagggatgcaaatcaggtgcaacatcagttatctggaggaatggctgaaggagaag
gagctgcaaagctcgaatgctatagacactctgaggccgttatctcaggccgcctggctg
ctgcaagtcaacaaatccactgacgacgacgccaaagagatcagcgacaaatgcaccgaa
ctcaactctgttcagattgtcaagattttgaactcctacacgcccattgacgattttgag
aaaagggtgtcgtcgtcatttgtccgcaaagttcagtcattacttcaagatcgtgacggg
tcctcgcagctgatgctggactcagactatcgtttccaggtcacgtttcccttctgctcg
tcccctcaggctctggagctgatgcaggtcccgagcagccttcatctgtctttcctaacg
aggatctga
DBGET
integrated database retrieval system
