Acanthopagrus latus (yellowfin seabream): 119024826
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Entry
119024826 CDS
T08233
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119024826 (rfwd3)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119024826 (rfwd3)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119024826 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
zf-C3HC4
WD40
WD40_CDC20-Fz
WDR55
zf-C3HC4_2
zf-RING_UBOX
EIF3I
zf-rbx1
Beta-prop_WDR3_1st
Beta-prop_EML_2
zf-ANAPC11
Rtf2
zf-RING_5
zf-C3HC4_3
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WD40_Prp19
zf-C3HC4_4
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
WD40_2
zf-RING_11
CFAP43_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
zf-Nse
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
119024826
NCBI-ProteinID:
XP_036963844
LinkDB
All DBs
Position
8:1452294..1464704
Genome browser
AA seq
716 aa
AA seq
DB search
MEAMEVDSPVEMRGRGSRQPAVAASAEDTNAPHVISDSSSSTEVDEDDEDDNDGGQMAAR
VPPRLPATWAFSQRAVGSSAATPSAAQPIRRRLRQGLRVHYPSQTAAPSRGFPDFLLRAP
AASVAEPESGSTTEVSESDEEEGAEEGPPAAVEPINPVLPASPRLNVSNQHTEPQEAGPT
NSSSAADGERTEAQNQVIQPVPVASASVQLAQSEEGEGDNCTICFEAWTTAGEHRLSALR
CGHLFGFMCIQRWLKAQGPDAKCPQCNKKAKQSDIVRLYAPKLRALDNSEQESLKKSLEQ
EQSLRRKAELESAQYKLTLQVVTNKYGQAQQELQELRALMAQAGRNSFPSSSSSSSASTS
LVLGLSHRADGSRTAQYSFSKAVLVSQTGGSRVLSYCEPLSCLLASQPSPHSTLVPGCGV
KKVSVVNMKASQYVPIHSKQIRGLSFNRQNDSLLLSAALDNTIKLTSLLTNTVVQTYNAG
KPVWSCCWCLDNSNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSRCPVASLCYVPRAAS
SSFPCGGLIAGSLEGGCFWEQVSETTYRPHVLPLETAGCTDIQVETESRHCLVTYRPGRS
NPSLRCVLMALNRTPQQDSSQLPSCSCSPVQTFSAGSSCKLLTKNAVFRSPDGGGTLVCA
GDEASNSTMVWDAGSGSLLQKLPADLPVLDISPFAVNGEHFLASLTEKMLKLYKWE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtggactccccagtggagatgcggggaagaggcagccgacagcca
gcggttgctgcctcagctgaggacactaatgccccacatgtgatctcagactccagcagc
agcactgaggtagacgaggatgatgaggatgacaatgatggaggacagatggcagctcgc
gtaccgcccaggcttcctgccacatgggcattcagtcagagagcagttggcagctctgca
gccacaccttcagctgctcagcccatacggaggaggctcaggcagggcctcagagtgcac
taccccagccagactgcagcgccttccagaggctttccagactttctgctccgagcacca
gctgccagtgtggctgaaccggagtccggcagcaccactgaggtgagtgagtctgatgaa
gaggagggggctgaagaaggcccacctgctgctgtggagccaatcaaccctgtgctgccg
gcgagtcctcgcctcaatgtctccaaccaacacacagaaccacaggaagctggtccaacc
aactccagttcggctgcagacggtgagaggaccgaagcacaaaatcaagtcatccagccg
gtccctgtggcctcagcttccgtccagctagcacaaagcgaggagggagagggcgacaac
tgcaccatctgcttcgaggcatggacgacagcgggcgagcacagattgtccgctcttcgc
tgcggacacctcttcggcttcatgtgcatccagcgctggttgaaagctcagggaccagat
gctaaatgtccacagtgcaacaagaaagcgaagcagtcagacatcgtgcggctgtacgct
ccaaagctgagagctctggacaactctgagcaggaaagcttaaagaagtctctggagcag
gagcagtctctgaggaggaaggctgaactggaatcagctcaatacaaactgacactgcag
gtggtcaccaacaaatatggacaagcacaacaggagctgcaggagctgagggctctgatg
gctcaggctggtagaaactcatttccctcctcctcgtcctcctcctcagcatcgacctcg
ctcgtcctcggtctttctcatagggcagacggctccaggacagcacagtacagtttttcc
aaggcggtgctggtgtcccagaccggaggctccagggttttatcctactgtgaacctctc
agctgcctgttggcatcgcagccttcacctcactccacactggtgcctggttgtggggtg
aagaaggtgagcgtcgtcaacatgaaggcgagtcagtacgttcccatccacagtaaacag
atccgaggtctgtccttcaacagacagaacgacagtctgctgctatctgctgctctggac
aacaccatcaaactgaccagtctgctgaccaacacggtggttcagacctataatgcaggt
aaacctgtgtggagctgctgctggtgtttggacaacagcaactacgtctatgcaggactg
agcaacggctccgtgctcgtctacgacaccagagacaccagcacacacgtccaggagctg
cagccgctacgctccaggtgtccagtggcgtctctgtgctacgtcccacgggcagcatcc
agctcgtttccctgtggtgggctgatcgccggctctctggagggcgggtgtttctgggag
caggtcagcgagaccacgtacagaccgcatgtcctgccgctggagacggccggctgcact
gacatccaagtggaaacggagagccgacactgtctggtcacctacaggccaggacgttcc
aacccgtctctgcgctgcgtcctcatggctctgaacaggacgcctcagcaggactcgagt
cagctgcccagctgctcctgctctccggtgcagacgttcagcgccggatcatcctgcaag
ctgctcaccaagaacgccgtgttccggagtccagatggaggcgggacgcttgtctgcgcc
ggggacgaagcctccaactcgaccatggtgtgggatgcaggcagtggctctctgctgcag
aagcttccggccgacctcccggtgttggacatcagtccatttgcagtgaacggcgagcac
ttcctggcctctctcaccgagaagatgctgaagctctacaagtgggagtga
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