Acanthopagrus latus (yellowfin seabream): 119024899
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Entry
119024899 CDS
T08233
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119024899 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119024899 (cnot2)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119024899 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119024899 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119024899
NCBI-ProteinID:
XP_036964004
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Position
8:complement(3104401..3110548)
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AA seq
529 aa
AA seq
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MFGARKKFVEFVEVVDNDFSDEGMYYNQPSMFPHRSDKDMLSSPSPSSSGQLSQLGASLY
GPQSALGFSVRGMGNNTPQLNRNLTQGTQLPSHITPTTGVPTMSLHTPPSPSRGTLPMNT
RNMLNHSQVGQGIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGM
NRNQAFGMNNSLSSNIFNGTGWCGDPDGSENVTGLDLSDFPALADRSRREGTGNPTPVLN
PLAGRAPYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPSLNSDDNKTNLNSTSKSTS
NADGPKFPGDKTASAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETDP
GMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKL
AAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKT
NAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagttcgtcgaggtagtcgataatgacttcagt
gatgaaggcatgtactacaaccagccgtcgatgttcccacatcgatcggacaaagacatg
ctttcatctccctcgccatcgtcgtcgggtcagctgtcgcagctcggtgcaagtttgtac
ggtccacaaagtgcactcggcttctcggtaaggggcatggggaataatacgcctcagtta
aatcgaaatttaacgcaaggcacgcagctaccaagtcacatcactcccacaacgggggtc
cccaccatgtccctccatactcctccatcaccaagcagggggacattaccgatgaacacg
aggaacatgctgaatcactctcaggtcggtcaaggcattggaatgagcggcaggaccaac
agtatgggcagctcggggctgggcagccccaaccgcagctcgcccagtatcatctgtatg
cccaaacagcaaccagcacgccagcccttcaccatcaacagcatgtcaggatttggtatg
aaccgcaatcaggcttttgggatgaacaactcattatcaagcaacatcttcaatggcaca
ggttggtgtggtgacccagatgggagtgaaaatgtaacggggctggatctgtcagacttc
cctgcgttagcagacaggagtcggagagaagggactggaaacccaacaccggtgctcaac
ccactggctggacgggctccctatgttggcatggtgaccaagccatcgactgaacagaca
caggatttctccatccataacgaggacttccctgcactgcctggcccaaactataaggac
ccctcgttgaacagcgatgacaacaaaactaacttgaactccacaagcaagagcacatcc
aacgcagatgggcccaagttccccggagacaagacggcctcagcacagaacaacaaccag
aagaaaggcatccaggtgttgcccgatggtcgggtgacgaacattccctcaggaatggtg
acagaccaattcggcatgattggcctgttgacgtttatccgggcagcagagacggatcca
gggatggtccatctagcactgggaagtgacctcacgacactgggactcaacttaaactca
ccagagaacttgtaccccaagttcgcctcgccttgggcttcatcgccatgtcgacctcaa
gacattgacttccatgttccctctgaatacttaaccaatatccacataagggacaagttg
gctgcaattaaactggctcgatatggtgaagacctgttgttctacctgtactacatgaat
ggtggagacctgctacagcttctggcggcagtagagctctttaaccgggactggaggtac
cacaaagaggagcgggtttggataacgagggcgcccggcatggagcctacactgaagacc
aacgcctacgagaggggaacgtactacttttttgattgtcttaactggaggaaagtagcc
aaggaatttcatctggagtatgacaagctggaggagaggccacacgtgccaacaacattc
aactacaacccagcccagcaggccttctaa
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