Acanthopagrus latus (yellowfin seabream): 119024942
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Entry
119024942 CDS
T08233
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119024942
03036 Chromosome and associated proteins [BR:
alat03036
]
119024942
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119024942
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119024942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
119024942
NCBI-ProteinID:
XP_036964084
LinkDB
All DBs
Position
8:30640820..30672848
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AA seq
859 aa
AA seq
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MIAANFSLLFQFLPIMDRGPTEGVGVVEVPTKDFPSIQAVHSQDAMVADLLQQAAEAGGV
VERQAGVVLEQGHGVAASQAQQQLMEAGVGVGVEGGAGVEMMVMDSLDPTLLQMKTEVID
AAVGGSSTTVGVVGGVAGAAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVS
ATTVEALQQGTFVDTTAMPKDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEEGGDAH
PEEEEEDEEVGNQLLEEGEDEPIRPSNDDPNWVKDPDYQPPSGTIKKTKKGKKSRLRYAE
GDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCP
RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGE
LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKR
HMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL
RKQHSFIETGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRT
HTGEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHAEN
CTGEVEDTENGAPTPKKGRRGRKRKMRSRRDEDDSEDDHADPEEEEEEEGEGEEEPSLLQ
EEEEAESMELDQAPAAIPVPAPDEPPVKRKRGRPPKNAPKTLTSSKSVRVAAKSTASAAA
IIQVEDESTGAVENIIVKKEDGDTSAATPLEQGVALTVEGVGMDGEGVETVELAVNEESA
TAAANGDLTPEMILSMMDR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagccaatttttcattgctcttccagttcctacccatcatggacagagggcca
acagagggtgtaggggtggtggaggtccccaccaaagactttccctccatccaggctgtt
cacagccaggatgccatggtagctgacctcctccaacaagctgcagaggctggaggagtg
gttgagagacaagctggagttgtcctggaacaaggtcatggggtagcagcctctcaggcc
cagcagcagctgatggaagctggggtgggggttggtgttgaaggtggagcaggagttgaa
atgatggttatggactcactggatcccaccctcttgcagatgaaaactgaggtgatcgat
gctgcagtagggggatcatcaactacagtgggtgttgtcggaggggtagcaggtgctgct
caccaagcaactgtgacaacagtggatcagactcaaatcattacactacaggtggtaaac
atggaggagcaggcagctctgggtctgggggagctccagctggtacaggtacctgtttct
gccaccactgtggaggccttgcagcaaggcaccttcgtagacactactgctatgccaaag
gatggcgacccagtcatctgtcacaccctgccactacctgagggcttccaggtagtcaag
gttggtgccaatggggaggtggagacggtggagcaggaggaggagggaggtgatgcccat
cctgaagaggaggaggaggatgaagaggtggggaaccagctgctagaagaaggtgaggat
gagcccattcggccttcaaatgatgacccaaattgggttaaagacccggactatcagccc
ccatctggaaccatcaagaagaccaaaaagggtaaaaaaagtcgtctgcgttatgccgaa
ggagataaggacatggatgtcagtgtctatgattttgaagaagaacagcaggagggcctt
ctgtcagaggtcaatgccgagaaagtggtgggtaacatgaaaccacctaaacccaccaag
atcaagaagaaaggagtgaagaagacgtttcagtgtgagctgtgtagctacacgtgccct
cgacgctccaacctggacagacacatgaaaagtcacaccgatgagagacctcacaaatgt
catctgtgtggaagagccttcaggacagtcaccctgctaagaaaccatttgaatacacac
accggaactcgtccacacaagtgcacagactgtgatatggcttttgtgactagtggagag
ctggttcgtcatcgtcgctacaaacacacacatgagaaaccatttaaatgctccatgtgt
gactatgccagtgtcgaggtgagcaaactaaagcgccacattcgttcccacactggcgag
cgtccattccagtgtagtctttgcagctatgccagtagagacacatacaaactgaagaga
cacatgaggacacactcaggagagaaaccttatgagtgctacatctgccatgcccgattc
actcagagtggaaccatgaagatgcacattctgcagaaacacacagagaatgtggccaaa
ttccattgcccacactgtgacactgtcatcgcacgcaagagtgacttgggtgtccatctt
cgtaagcagcactcgtttattgagactggaaagaagtgtcgttactgtgacgctgttttc
cacgagcgctacgctctaatccagcatcagaagtcccataagaatgagaagaggttcaaa
tgcgatatgtgtgactactgctgccgccaggagcgtcacatggttatgcatcgtagaacc
catactggagagaaaccatacgcctgcagccagtgcgagaagactttcagacagaagcag
ctgctggacatgcacttcaaacgctaccatgatcccaactttgttccaaccgccttcgtc
tgccccaaatgtagcaagaccttcactcggaggaacaccatggctcgccatgctgagaac
tgcaccggtgaggtggaggatacagagaatggagctccgacccccaaaaaaggaaggaga
ggaaggaagagaaagatgaggagcaggagagatgaggatgacagcgaggacgatcacgct
gatccagaggaggaggaggaggaagagggtgagggtgaggaagaaccatcactgctgcag
gaagaggaggaagcagaaagcatggaactggaccaggcccctgctgccatcccagtaccg
gctcctgatgagccaccagtcaagaggaaacgaggccgacccccaaagaacgcccccaag
actctgacatccagcaagtcggtccgggtggctgccaagtcaactgcttctgctgctgcc
atcatccaggtggaggatgagagcactggagcagtggagaacattatagtgaagaaagag
gatggtgacacctctgcagcaacacctctggagcagggtgtggccctgactgtggagggt
gtggggatggatggggaaggggtagagactgttgagctggctgtgaatgaggaatcggcg
actgcagccgctaacggagatctgacaccagagatgatcctcagcatgatggaccgatga
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