Acanthopagrus latus (yellowfin seabream): 119024961
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Entry
119024961 CDS
T08233
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119024961 (tmc6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119024961 (tmc6b)
03037 Cilium and associated proteins [BR:
alat03037
]
119024961 (tmc6b)
Transporters [BR:
alat02000
]
Other transporters
Pores ion channels [TC:
1
]
119024961 (tmc6b)
Cilium and associated proteins [BR:
alat03037
]
Other cilia and associated proteins
Stereociliary proteins
119024961 (tmc6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
119024961
NCBI-ProteinID:
XP_036964115
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All DBs
Position
1:complement(23338700..23352545)
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AA seq
834 aa
AA seq
DB search
MARNVNFDLSHPLMEAGLESPVDEEGVHDSFNQLIAEQSQNGGPTEAFELQQLQRDLDEE
GRDGIAYLSSPGGRQRQRDMEWEDDERQTDSLIAERWSSATLKVLSSMPSRTIGRSRGAI
ISQYYNRTMQLRRRRQSRPAIRDFSRSARPSIRGYGMEADTTDAQEAERNKRERLVNNLQ
NLSVSDRVRMLRGMPLSVAEKSELRRLALQKQSHRLSSSKIPCCSRLKYYIIIAVRQSWY
SWLSFLHSLQLWQVALKRVSGRFGTGVLSYFLFLKTLLFFNLFLFVVTGAFLVLPQAVHP
PVLSTARPAFTGLEFLTGAGYFSDTVMYYGHYSNYTLRKGCRDDVGGQNLSVSNGTSLDC
VSKHHSYNMPLAYFVTIGVAFFVTCIILVYSMSKSFGQSFRIDKSHSILAVKVFCSWDFK
VIKRTSVRLMSENICIQLKELLAEVNHKNIMNTVCQKLSRLMVHGLAWAICIGSNTACVY
AIYWFSDHMHKNLQLTSRSTTKDPLLYEASLLAPPVVVSLINLLLPGLFNLAAWMEDYES
PSVRTYVAIGRNLMLKVSILGVLCYHWLGRVAADPKIIGLECWESFVGQELYRFLLMDFI
FTLLDTLFGELLWRLFSERVLKRRRMPEFDIARNVLELIYGQTLAWLGVLFTPLLPAVQI
LKLLLLFYIKKSSVMMNCQAPRRPYRVSQMTTIFITLLCFPSFLGASVCVTYTMWSITPS
TSCGPFRELKTMFQAGKRWVEELERDNPNLSPLAWAHSYLVEHPFFLFVGAGIFLIVIYF
HSQVVDGQRKIINLLQEQIENEGEDKKFLITRLQSIHEQKRTPARRLTSQDSSC
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaacgttaactttgacctgagccaccctctcatggaagctggactggagagt
cctgtggatgaggaaggtgttcatgactcgttcaaccagctgatagcagagcagagtcag
aatggaggaccgactgaagccttcgagctgcagcagctgcagagagatctggacgaggag
ggtcgagatggtatagcttacctgtccagccctggaggccggcagaggcaaagggacatg
gaatgggaagatgacgaaagacagacagactccctcatagctgaacgttggtcctcggct
accttgaaggtcctgtcctccatgcccagtcgcaccattggtcgcagccggggagccatc
atctctcagtactacaacaggaccatgcagcttcgaaggcgcaggcagagcagacccgca
attcgagacttctctcgctctgcaaggccgagcatacgaggctacgggatggaggctgac
actacagatgcacaggaagcagagaggaacaagagggaacggttggtgaacaacctgcaa
aacctgtcagtgagcgacagagtcaggatgctcagagggatgcctctcagtgtggctgag
aagagtgaactgaggaggttagcactacaaaagcagagtcacagactgtccagcagtaag
ataccttgttgcagtcggctcaaatattacatcatcattgctgtcagacagagctggtac
agctggctgtccttcctgcactccctccagctgtggcaagtggcgctcaagagagtgagc
gggcgtttcggcacaggagtcctctcatacttcctgttccttaagaccctgctcttcttc
aacctcttcctgttcgtggtgacgggtgccttccttgtgctgcctcaggcagtgcaccct
ccagtgttgtctacggctagacccgccttcactggactggagttcctcaccggagcgggt
tatttctcagacacggtgatgtactatggacactactctaactacacactgcgcaagggc
tgcagggatgatgttggagggcagaatttgtctgtgtccaatggaaccagcctggactgt
gtgtcaaaacaccactcttacaacatgcctcttgcatactttgtcaccattggagtggct
ttcttcgtcacgtgtatcatccttgtatacagcatgtcaaagtcgtttggtcagagcttc
cgaattgacaagtcccacagtatcttggcagttaaggtcttctgctcctgggactttaag
gtcattaagagaacctctgtcagactcatgtctgagaatatctgcatccagcttaaagag
ctgctagcagaagtgaatcataaaaacatcatgaacactgtgtgccagaagctctccagg
ctgatggttcatggcctggcctgggctatctgcataggcagcaatactgcctgtgtgtat
gctatttactggttctctgatcacatgcataagaatctccagttaacttctcgcagtact
actaaggaccctttgctgtacgaggcaagtctgctggctccccctgtggtcgtgtcgctc
atcaacctgctgctgcctggcctcttcaaccttgcagcctggatggaggactacgagtca
ccttctgtacgcacatacgttgccatcggcagaaacttgatgttgaaagtgagcatcctt
ggagtcctgtgctaccactggttgggtcgggtggctgctgaccctaaaatcattggactg
gagtgctgggagagttttgtcggccaggagctttatcgtttcctactgatggacttcatc
ttcactctactggacaccttgtttggagagcttctttggaggttgttctctgagagggtg
ctgaagagaaggaggatgccagagtttgatatcgccaggaacgtccttgaactcatctac
ggacagacgttggcctggttgggtgttctcttcactcctctcctgcctgcagtgcagatt
ctcaaactcttgctcctgttctacattaagaagagcagcgtgatgatgaactgtcaggcc
cccaggaggccatacagagtcagccagatgaccaccatcttcatcactctcctctgcttc
ccctccttcctcggtgcctcggtgtgtgtcacatacaccatgtggagcataacgccctcc
acgtcgtgcggtcccttccgcgagctcaaaacgatgttccaggcgggaaagcgctgggtg
gaagaactggaaagagacaatcccaacctgtccccactggcctgggctcactcctatctg
gtggagcacccgttcttcctgtttgtgggagcaggcatcttcctgatcgtcatttacttc
cacagtcaggtggtggacggtcaaaggaagatcatcaacttactacaggagcagatagaa
aacgagggagaagataagaagtttttgataactcgcctccagtcgatccatgagcaaaaa
cgaacccccgctcgaagacttactagtcaggactccagctgttga
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integrated database retrieval system
