Acanthopagrus latus (yellowfin seabream): 119025230
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Entry
119025230 CDS
T08233
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119025230 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119025230 (u2af1)
Spliceosome [BR:
alat03041
]
Complex A
U2 snRNP components
U2 related factors
119025230 (u2af1)
Complex B
119025230 (u2af1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
119025230
NCBI-ProteinID:
XP_036964503
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All DBs
Position
9:11512467..11516271
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AA seq
232 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRERRSRSRDRGRGGGRDHERRRSRDRERSGRF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacctggcatccatttttgggacagagaaagataaggtcaactgctctttt
tattttaaaattggtgcctgccgacatggcgaccgctgctccagattacacaataagccg
acattcagccagactattgccctcctgaacatttaccggaacccacagaacagtgctcaa
tctgctgatgggctgacctgtgccatcagtgacatggagatgcaggagcactatgatgag
ttttttgaggaagtcttcacagagatggaagaaaagtatggagaagtggaggaaatgaac
gtatgtgacaacctcggggaccacctagtaggaaatgtgtatgtcaagttccgttacgaa
gaggatgcagagaaggccgtgatggacctgaataaccgttggtttaatggacagcccatc
catgctgagctctctcctgtcacagatttcagagaagcttgctgtcgccagtatgaaatg
ggagaatgcactcgtggtggcttctgtaacttcatgcatctgaagcccatttcgcgtgaa
ctgaggagagagctctatgggcgtcggaggaagggccgtcacaggtctcggtctcgatcg
agagagaggcgatctcgctctcgggacagaggtcgaggaggtggacgtgaccacgagagg
cgtcgttccagagacagagaacgttccgggagattctga
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