Acanthopagrus latus (yellowfin seabream): 119025250
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Entry
119025250 CDS
T08233
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119025250 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119025250 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119025250 (pcdh7a)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119025250 (pcdh7a)
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Protocadherins
119025250 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119025250
NCBI-ProteinID:
XP_036964531
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All DBs
Position
1:complement(15732235..15777084)
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AA seq
1374 aa
AA seq
DB search
MQRLGAVHSSAAQALSLLVLVLQLLTQLPGADSALRYRVAEEGPPDVKIGNVAADLGLTA
GTGSGDVTFALESGSEYFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGI
DRYELIQDGGAGSSSARRTAGGSPIARVDGLGDRRGRSGDSGAGARSTVFELQVADIPDG
EKQPQLIVKGTLDREQKDSYELILRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYE
AEMAENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRID
REEVAQLRFTVTARDRGQPPRTDRTTVILAVRDENDNVPSVEIRKIGRIPVRDGAALVPE
NVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADEAFDRNKKKY
FLHTSALLDYEATKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPTFAQSVVEVHFA
ENNSPSERVVTVVATDADSGKNAEIAYSLDPAGNGPFYIDADNGDIRATGVLDREQRERY
ELRVIAKDKGTPSLQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTD
ADEGENAELSLFVEMDGADEKKPGEKTEGEDGEKGQEEVFSIENNTGTIFSSASFDREKL
STYTFRVRAVDGGEPRKTATATVSLFVTDENDNAPSITSPANESYTLLPPASSARTIVRT
VTAIDSDTGLNADLHYALVGGNPFRLFEIGHTNGVITLAEPLERRHRGLHRLVVRVNDSG
IPSLCATALVHVFINESLTNATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIG
VLAGAAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPPGAQPQAGRGRGSDRGR
KPRRDKRNGSGGGAVVGGGKSDRSLYSGIVTVNGLRRHANDDDEEDLSSASERLAARYCV
VDGDPGSPRMSGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQDLPPSNT
FVGSGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYSKQGTLRRVTFSVVS
QPQDGGCYDSGLEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQL
PDVALTGKCTRECDEFGHSDTCWMPIRPSPRQRQRHGSDPPRLSTFAPGDDNNNLRGNDH
ESDSESAGSAGSSEPGMVVGGEGQRLPLVNGDPLGTLGRGDRNRNVGDHNRNLLNRKMTS
ASYDTFSSAGFGRRQPEEEGGEGQNPPEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcttggtgcagtgcactcctccgcggcgcaggctctcagcctcctggtctta
gtgctgcagctgctgactcagctgccgggtgccgactcagctctccggtaccgggtggcg
gaggagggcccgcctgacgtcaagatcggcaacgtggccgccgacctgggcctcacggcg
ggcacgggcagcggggacgtcaccttcgccctggagagtggctcagagtacttcaagatc
gacaacgtgacaggtgagctgacgacgggcccgcggcgcatcgacagggagaagctcccg
cagtgccagatgatatttgacgagaacgagtgcttcctggacttcgaggtgtccgtgata
gggccactgcagagctgggtggacctgttcgagggccgagtggtcataacagacatcaac
gacaacacgccctccttcccctcacctgtgctccagctgtcggtggaggagaaccgccca
ataggaaccctctacctgctgcccacggcgaccgacagggatttcgggcgaaacggcatc
gaccgctatgagctcatccaggatgggggagctgggtcaagctcagcgaggcgcacggca
ggagggagccccatcgccagggtggatggacttggtgaccggaggggtcgaagtggagac
agtggagccggggccaggagcaccgtgttcgaactgcaggtcgcagacataccagacggc
gaaaaacagccacagctcatcgtgaaaggcacgctggaccgcgagcagaaagactcctat
gagctcatcctcagggttcgagatggagggaacccgccacgttcctcccaggccctgctt
cgcgtttccatcactgacgtgaacgacaacagcccgcagtttgagaggtccacgtacgag
gcagagatggcagagaatgctcccccaggtacacctgtcctccaggtcagagcctcggac
cgagacattggcgtcaatgggcaggtggagtatgtctttggagctgccactgaatctgtc
aggcgactcctgcgtctggacgaggcaacggggtggctgagcgttctccacaggatcgac
agggaagaagtggctcaactgaggttcacagtaacggccagagacagaggtcagccaccc
cgcaccgaccgcaccactgtcatactggctgtccgggatgaaaatgacaacgtcccatcc
gtagagatccgaaagattggacggatccctgtcagggatggagcggcgttagttccagag
aacgttctggtggacaccccagtggctctggtgcaggtgtcggaccgagaccagggagag
aatggggctgtgacgtgcaccgttgtaggagacgtcccgttcactctgaagccagccggc
gaaacagcactcccacccctacctgcagatgaagcctttgacaggaataagaaaaagtac
ttcttacatacttctgccttgctggactatgaggccaccaaagagtacagtgttaccatt
gtggcagtggactctgggagccccagtctgtccagcaacagctccctgatggtgcgagtg
gtagacatcaatgaccatgccccaacctttgcccagagtgttgtggaggtccactttgcc
gagaacaactcacctagtgaaagggtcgtcactgtggtggccacagacgcagacagcggc
aagaacgctgagattgcatactcgctggatccggctggtaatgggccattttacatagat
gcagataatggagatatacgtgccacgggggttctggaccgtgagcagcgagagaggtac
gaactccgggtcattgccaaggacaagggaaccccgtctctgcaaggctctgcaactgtt
gttgtgcaggtgaccgaccgcaatgacaacgcgccaaagtttgtccaggaaatctttaca
ttctacgtgaaagagaacctgcttgccaacagcccagttggcatggtcacagtgaccgac
gcagacgaaggcgagaacgccgagctcagtctgttcgtagagatggatggagctgatgaa
aagaagccaggagagaaaacagagggagaagatggcgagaaagggcaagaggaggtgttc
tccatcgagaacaacacgggaactatcttctcgtcagcgtcattcgaccgcgaaaaactt
tccacctacaccttccgtgtccgagctgtggatggaggggagccacgcaaaaccgccact
gccaccgtgtcgctctttgtgacggacgaaaatgacaatgccccttcaatcacctctcct
gccaatgaatcctacacgctccttcctcctgccagcagtgcccgcaccattgtcaggact
gtaacagccatagactcagacactggccttaatgcagaccttcactatgctcttgtgggg
ggaaatccattcagactgtttgagattggccacaccaatggagtgatcactcttgcagaa
cctctggagcggcgccacagaggtctgcatcgcctggttgtccgtgtcaatgatagcggg
atcccctctctctgtgccactgccctggttcatgtcttcatcaacgagagcctgacaaac
gccaccctagtggatgcacaggtggcccgaagcttgatggctcccctgtctctggatatc
gcgggggatccagacagcgagcgtgcattggggaaacagcggctcagtgttgccatcggt
gtcctggcgggagctgcagctgtcatcctggtcatcctgcttgtagtcacagctcggcag
tgcggcgctcagggcaagaatggctacgaggccgggaagaaggagccggaggaagacttc
ttcagtcctccgggggctcaaccacaggccggccgggggaggggatcagaccgtgggcgc
aaacctcgacgggacaaacgcaatgggagtggcggtggtgcggttgtcggaggagggaag
tccgacaggtcactctacagcggcatcgtcacagtcaacgggctgcgccgccacgccaat
gacgatgatgaggaggatttgagcagcgcgagtgagcgcctggcggcccgctactgtgtc
gtggacggtgaccccggcagcccgcgcatgagcggtggcaggagacaccagtcaagccca
gatctggccaggcactacaaatccagctcccctctccccgcagtgaatctgcagccccac
tcccccccagctgagggcaagaagcaccaggcggtccaggacctgcctccctccaacacc
tttgtgggcagcgggggctgcgtggggagtgccggctccagcagcagcagcagtgggggc
agtggcaatgcagatgccatgtccctaggatctgaccagtgctcagagtacggctgccag
actgggaacaagtacagcaaacaggggacccttcgccgggtgaccttctcggtagtcagc
cagccccaggacggcggttgctatgacagtggcctggaggactcggagacgccgagcagc
aagagttcatcagggccgcggctgggagccctgccgctgcccgaggaaggctacgagcgg
acgacaccggagggcagtgtgggggaagaggagcatgtggagaatgatgccagacagctg
ccagatgtagccctgacaggaaagtgtaccagggagtgtgatgagtttggccattctgac
acttgttggatgcccatccgcccatcgcctcgccagcgtcagcgccacggcagcgacccc
cctcggctctccaccttcgccccgggagacgataacaacaatcttcgtggcaatgaccat
gagagcgacagcgagagcgccggcagcgcggggagctcagaacccgggatggtcgtcggt
ggagaaggtcagagattacctttagtcaacggagatcctctcggcaccctgggtagagga
gaccgcaacaggaacgtgggcgatcacaaccgtaaccttctgaaccgcaagatgacttca
gcatcctatgacacgtttagcagcgcaggcttcgggaggcgccagccagaggaggaagga
ggagagggccagaacccacctgaggtcataccactgacgcggacaggtggcgactacaag
accacgtcctgcctcacgttgtcacgccgcgaggtctacctgtga
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