Acanthopagrus latus (yellowfin seabream): 119025311
Help
Entry
119025311 CDS
T08233
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
alat03037
]
119025311 (ift88)
Cilium and associated proteins [BR:
alat03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119025311 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_7
TPR_14
TPR_6
TPR_16
TPR_11
TPR_9
ANAPC3
TPR_17
SNAP
TPR_10
ARM_TT21_5th
TPR-S
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_C
ARM_TT21
DUF2225
Consortin_N
TPR_MalT
DUF2989
HAT_PRP39_C
MIT
SHPRH_helical-1st
TPR_15
RPN7
Coatomer_E
RNPP_C
ARM_TT21_2nd
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
119025311
NCBI-ProteinID:
XP_036964631
LinkDB
All DBs
Position
9:complement(5816594..5840304)
Genome browser
AA seq
824 aa
AA seq
DB search
MENVHLAMEEDDLYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTAIGA
RPLATSFGARIPMVSSMGRPVTGAVQDGAARPMTAVRAAGYTSSLTRGSTFDPLGQSRGP
APALEAKNEDTPEEKIKILEKKVNDLIEESCMAQSRGALQLALEKAKEAGKKERALVRQR
EQSGNADHINLDLTYSVLLNLANQYVNNEMYPEALNTYQVIVKNKMFSNAGRLKVNMANI
YVKQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFVRMGQYSDAITSFEHIMSES
PNIKTGFNLILCYYAIGDRERMKKAFQKLISVPLGIDDEDKYIPSNDDTNSNMVIEAIKN
DKLHQMERDLKVLTEKYIMTAAKLIAPAIETSFATGFDWCVDMVKSSQYVELANDLEINK
AITYLRQKDFNQAVETLKTFEKKDSRVKSAAATNLSFLYYLEKDFDQADRYADLAMNADR
YNPAALNNKGNTVFAKQDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLNRLEEALDCF
LKLHAILRNSAQVMYQLAHLYELLEDPQQAIEWLMQVVSVTPTDPQTLAKLGELYDSEGD
KSQAFQHYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLMVA
SCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQEYTTKLKKVEKMKE
IREQRVKSGRDGSARSRREGREGSAGSADSSHSSSSTKGERLSAKMRSLPGSNEPYEASS
PKEIDASYVDPLGPQMERPKTGAKKRGEDDDFADEELGDDLLPE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgtgcacctggccatggaggaggatgatctttattccggttacaacgactat
aatccaacatttgactctgaggagttggagaatgatgtgggtttccagcaagcagtgagg
acaagtcatggaagaagaccaccgatgactgccaaatttcctggcactgccattggagct
cggcctttggcaacgtcctttggagcgcggattcctatggtctcttcgatgggcagacct
gtgactggagctgtgcaggatggtgcagcccgaccaatgactgcagtcagagcagcaggt
tacacctcctccctgacccgcggctccacctttgaccctctgggccagtccagaggtcct
gcacctgcccttgaagcaaagaatgaggacacgcctgaggagaagattaagatcctggaa
aagaaagtgaatgacctgatagaagagagctgcatggcacagagcagaggagccttacaa
ttggctcttgaaaaagccaaagaggcagggaagaaagagagagcactggtgagacagagg
gaacagtctggcaatgctgaccacatcaatttagacctcacctactctgttttgctcaac
cttgccaaccagtatgtgaacaatgaaatgtatccagaggccttaaacacctaccaggtc
attgtgaagaacaagatgttcagtaatgcaggccgtttgaaagtcaacatggccaacatc
tatgtcaagcagaagaactaccctaaagccatcaagttctaccgaatggcactggatcag
atctcaaacgctcacaaggaaatgagaatcaagataatgcagaatattggcgtggtcttt
gtccgtatgggccaatactccgatgccataacgtctttcgagcacatcatgagtgagagc
cccaacattaagacgggtttcaacctcatcctgtgctactatgctattggtgacagggag
aggatgaagaaggcctttcagaagctcatctctgttcctctgggcattgatgatgaagac
aaatacatcccatctaatgatgacaccaactcaaatatggtcatcgaggccatcaagaat
gacaaacttcaccagatggagagagatctaaaagtcctgactgagaagtacatcatgact
gcagccaagctcattgctccggccattgaaacctcttttgcaactggatttgactggtgt
gtggatatggtgaagagttctcagtatgttgagctcgccaatgatctcgagataaacaag
gccatcacctacctcagacagaaagacttcaaccaggctgtggaaactctcaagactttt
gagaagaaggacagtagggtgaagagtgcagcagccaccaacctctccttcctgtactac
ctggaaaaagattttgatcaagctgatcgatacgctgacctcgccatgaacgctgatcgc
tacaacccagcagcactaaacaacaagggcaacacagtgtttgccaagcaagactatgag
aaggctgcagagttctacaaagaagcgctgagaaacgattcctcctgcactgaggccctg
tacaacctgggtctaacatataagaggctgaatcgtctggaggaggctctggactgcttc
ctgaagctccatgccattctgaggaacagtgcacaagtcatgtaccagctggcacacctc
tatgagcttttggaagatccccagcaggcaatcgagtggctgatgcaggtcgtcagtgtg
actcccactgatcctcagacactggccaaactgggagagctgtatgatagcgagggtgac
aagtctcaggctttccagcactactacgagtccttcaggtacttcccctccaacatcgat
gtgattgagtggctcggggcttactacatcgagacacagttctgtgagaaggccattcag
tattttgaaagagccacactcatacaaccaacccaggtgaagtggcagctaatggtggcg
agctgctacaggagaagtggaaactaccagaaagctctggaaacatataaagacattcac
cgcaagtttccagaaaacgttgaatgcctgcgtttcttggtgaggctgtgcacggacatg
ggattgaaggaagtgcaagaatacaccaccaagctgaagaaggtggagaagatgaaggag
atcagagaacagagggtaaagtcggggcgtgacggcagtgccagaagtcgccgagaaggc
agagagggcagcgccgggagcgctgatagcagccacagcagcagcagcactaaaggagag
cgactgagcgccaagatgaggtcacttcctggttccaatgagccctatgaggccagcagc
cccaaagaaatagacgcttcatatgttgacccgctgggccctcagatggagagaccaaag
acgggagccaagaagcgcggggaggatgacgactttgcagatgaagagctgggagacgac
ctgctgccggagtga
DBGET
integrated database retrieval system
