Acanthopagrus latus (yellowfin seabream): 119025315
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Entry
119025315 CDS
T08233
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119025315 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119025315 (pou2f1b)
03021 Transcription machinery [BR:
alat03021
]
119025315 (pou2f1b)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119025315 (pou2f1b)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119025315 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119025315
NCBI-ProteinID:
XP_036964636
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All DBs
Position
9:complement(11117552..11138935)
Genome browser
AA seq
703 aa
AA seq
DB search
MADGGAASQDESSGPDAKVNNQSETTKCAMESGDANTGITTNGLDFQRQTVPTTSAITNA
HAQALLQQSKSEDSSALPTSVQQSVLPQTQLMLAGGQIAGLTLTPAHQQLLLQQAQAQLL
AAAVQHSASQQNSTTGASISASAATPITQLPLSQPIQIASQLQQQCLPQFVLVQPGNPIA
TPLSPGQFIISQTPQAQQSMLQAQNLLTQLPQSQANLLPTQPSITLATQPATPTRTTAAT
PIQSLPHSQTPPKRLDTPTLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGN
DFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLTSDQALSSPSALGSPGTGME
MLNRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK
EKRINPPSSGSSGGGNTPIKTIFTPSSPLVASTASLVSSPTINTPTTLTVNTVMPLTSTS
LAFTGSTVGATNTASVISTAPMVTTVTSSPSLSPSPTTIQSSTTESKIGTHAQTIFTQAP
TSIATTLGGQVMVAAPGFSTGQLPTSIAAMAAAAGLSPGLIASSQFASGGALLSLTPGGL
GNALSPALMSNSTLIQALASSGTIPITSLDGSNLLFANTSAGNTPSLVTTPLFLSPQNLG
LLASNPVSLVSAGAGLQVTADHQATTAAVPVQASTITTASKAQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagatgctaaagtgaat
aatcagtcagaaactactaaatgtgcaatggagagtggtgacgcgaacaccggaatcaca
accaatggcttggactttcagaggcagacggtgccaaccacaagtgcaatcacgaatgca
catgcacaagccctcctccaacagtctaagtcggaagactcgagtgctctcccgacctcc
gtccagcagagcgtattgcctcaaacccagctaatgttggccgggggacagattgcagga
ctgaccctgaccccggcacatcagcagctgttactccagcaggcccaggctcagctcctg
gctgcagccgtgcagcattcagccagccagcagaacagcaccactggggccagcatctcg
gcctccgcagccacacccattacccagctgcccctgtcacagcccatccagatcgcctct
cagctacagcagcagtgtctgcctcagtttgttctggtgcagcctggcaacccgattgcc
acaccactgtcgcccggtcagttcatcatctcgcagacaccgcaggcccaacagagcatg
ttgcaagcccagaatcttctaactcaactacctcaaagccaagctaacctcctgccgact
caaccaagcatcacccttgcaactcagcctgcaactccaacccgcacaacagcagccaca
cctattcagtccctgccccacagtcagaccccacctaaacggttggatacccccactttg
gaggagcctagtgatcttgaggaactggaacagtttgccaagaccttcaaacagaggcgt
atcaaactgggctttacacagggggatgttggcctggccatggggaagctgtatggaaat
gacttcagccaaacgaccatctctcgctttgaggccttgaacctgagctttaagaacatg
tgcaagctgaagccattgttagagaagtggctcaatgatgcagtttgtgcagagaacctg
acatctgaccaggccctatccagccccagtgccctgggctccccgggcacgggcatggag
atgctcaaccgcagacggaagaagaggaccagtattgagaccaacatccgagtggcctta
gaaaagagctttttggagcagaaccaaaaacctacctctgaagagatcaccatgatcgct
gaccagctcaacatggagaaggaggtgattcgggtctggttctgcaatcgccggcagaaa
gagaagaggattaaccctcctagcagtggcagcagtggaggaggcaacacccccatcaaa
accatttttaccccaagtagcccgttggtggccagcacagcaagccttgtgagcagtcca
actataaacacacccaccactctgactgtaaatacggtgatgcctctcaccagcaccagt
ttggctttcacaggttcgacggttggagccacaaatacagcatctgtcatctccactgca
cctatggttactacggtaaccagctccccatctttaagcccatcgccgacgactattcag
tcctcaaccactgagagcaagattggcactcatgcgcaaaccatcttcacccaggccccg
acgtccatagccaccactttaggtggtcaggtgatggtggcagctccagggttttctact
ggccagttacccaccagcatcgctgctatggctgctgcggcagggctcagcccaggactg
atagcctcctctcagttcgcttcagggggggccttgctcagtctaactcctggtggcctt
ggcaatgcgctgagtcctgccctgatgagcaacagcaccctcatacaagctctggcatcg
agcggcacaatccccatcacttctctggatggcagtaacctgctgttcgccaacacctct
gctggtaacacgcccagcctggtcaccacgccgctcttcctgagcccccagaacctgggg
ctgctcgccagcaaccccgtcagcctggtgtcggcgggggcggggctgcaggtcactgcc
gatcatcaagccaccacggctgctgtgcctgtgcaagcctcgaccattaccactgcctcc
aaggctcagtga
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