KEGG   Acanthopagrus latus (yellowfin seabream): 119025394
Entry
119025394         CDS       T08233                                 
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04382  Cornified envelope formation
alat04510  Focal adhesion
alat04512  ECM-receptor interaction
alat04514  Cell adhesion molecule (CAM) interaction
alat04518  Integrin signaling
alat04810  Regulation of actin cytoskeleton
alat04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119025394 (itga6a)
   04514 Cell adhesion molecule (CAM) interaction
    119025394 (itga6a)
   04518 Integrin signaling
    119025394 (itga6a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119025394 (itga6a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119025394 (itga6a)
   04810 Regulation of actin cytoskeleton
    119025394 (itga6a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    119025394 (itga6a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alat04147]
    119025394 (itga6a)
   04515 Cell adhesion molecules [BR:alat04515]
    119025394 (itga6a)
   04090 CD molecules [BR:alat04090]
    119025394 (itga6a)
Exosome [BR:alat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119025394 (itga6a)
  Exosomal proteins of breast milk
   119025394 (itga6a)
Cell adhesion molecules [BR:alat04515]
 Integrins
  Integrin alpha subunits
   119025394 (itga6a)
CD molecules [BR:alat04090]
 Proteins
  119025394 (itga6a)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 119025394
NCBI-ProteinID: XP_036964790
LinkDB
Position
9:complement(14990994..15025930)
AA seq 1092 aa
MMLLLGGPSAAPAALLFYSYFLETTLVLAFNLDTGHVIRKDGEPGSLFGFSLAMHRQLNP
DKRLLLIGAPRARALGKQKANITGGLYKCEITQSNDCERVEFDNEENVRTENKENQWMGV
TVQSQGPGGKIVTCAHRYQRRLFVDTPQESRDITGRCYVLSQDLTINEHSDEDGGNWNFC
EGRARGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEMGVYDDG
PYEVGDEHQLNPELVPLPANSYLGFSLDSGHRITRGRDLTVVAGAPRANHSGAVVLLRKE
SDISSRLLVEHTLYGPGLASSFGYDVAVVDLSGDGWQDIVVGAPQFYMKDGDVGGAVYVY
INQAGRWDRITPVRLNGTKDSMFGLAVENIGDINQDSYEDIAVGAPYDDSGAGKVYIYHG
SAEGIKTSPAQILSGTPHNMRLFGYSLAGNMDLDSNSYPDVAVGSLSDSALIYRARPVIS
ISRAVKVSPQEIDLAIKTCGSSICFTVEACFFYEAKPASYSPRLTISYTVEADGERRKQG
LPSRAMFNKSHTDVDYQFNGTLDLRGQKQKACINIVTKLKDNIKDKMRSIPIEVSAEIVS
TKRQKVRNGLPPLMPILDSSQPSKDVIEVNFVKEGCGSDHVCRSNLKMEYKLYYKPNNQE
NYTELLPTKKSIPVFHLNYEKKDLAIWVRVNNMNGDDAYEAKLVGTFPDGVSYSGVRSQQ
TTAEKPIICTANQNGSQADCELGNPFKSNSTTTFYIILSTSGMTLNTTEIDIDLQLQTTS
VQDNLASVKVKVKVIIELPLSVSGEANPNQVSFGGVVKGESAMKTEEEIGSLINYTFRIN
NVWKTLTHPVKASLRIQWPKFNKHGKWLLYLVKISSPGPQEILCSPESEINSLKHIRESS
ASRTKREIGERKPVSKMSSLSGKNKVLSCGKDIQCVELSCPLQGLDGTAVELRSRLWNST
FIEDYASLSYLEIVVKASLVLQGQPNNMILRTPDTEVKVTVTSEGAVAQHTGVPWWIILV
AVLAGILILALLVFLLWKCGFFKRSKRDDSVPRYHAIRIRKETPEYKDGTVKLDAFERKQ
WMTSWIDNESYS
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgatgctgctgctgggaggaccctctgccgctcctgctgcacttttattttattcctat
tttctggagacaactctggtgctcgccttcaacctggacaccggtcatgtcatcaggaag
gacggggagccgggcagcctgttcgggttctccctggccatgcaccggcagctcaacccg
gataaaagactgctgttgattggtgcgcccagagctcgagctttgggaaaacaaaaagcc
aacatcactggaggcctttataaatgtgaaatcacccagtccaatgattgtgagcgcgtt
gaatttgataatgaagagaacgtgcgtactgagaacaaggagaatcagtggatgggtgtg
acggttcagagtcagggacctggaggaaagatagtgacttgtgctcatcgctaccagcgg
cgcttgtttgtggacacccctcaggagtcccgggacatcaccgggcgctgttacgtcctg
agccaggacctgaccatcaacgagcactctgatgaggacggaggcaactggaacttctgc
gagggcagagccagaggacatgaaatgtttgggtcttgtcagcagggtttggcagccact
ttcaccaaagactaccattacgtcgtgtttggagcaccaggagcttacaactggaaaggc
attgtgcgagtggaacaaaagaacaacactttgcttgagatgggagtttatgatgatggc
ccgtacgaagtcggagatgagcatcagttgaaccctgagctcgtgcctctacctgccaac
agctacctcggattctccctcgattcgggacacagaatcaccaggggtcgtgacctgacg
gtggtggctggagcgcccagagccaatcacagtggagcggtggtcctgttgaggaaagag
agcgacatctccagcagactattggtggagcacaccttgtatgggccgggactcgcttcc
tcctttggatatgacgtagccgttgttgacctgagcggtgatggatggcaagacatagtt
gttggggctcctcagttctacatgaaggatggagacgttggaggagctgtttacgtctac
atcaaccaggcgggaaggtgggacagaatcactcctgtgcgtttgaacgggaccaaagac
tccatgtttggactggcagtggagaacattggagacatcaatcaagactcatatgaagac
atcgcagtcggagctccttatgatgacagcggggcgggaaaagtctacatttatcatggc
tctgcagagggaatcaaaaccagccctgctcagatcctctcaggaacaccgcacaacatg
agactgtttggatattctctggcagggaacatggacctggacagtaactcttacccagac
gtggctgtcggctctctgtcggactcggctctaatctacagggctcggccggtcattagc
atcagtagggctgtcaaagtatctccacaggaaattgacctcgctattaaaacctgtggg
agcagcatttgcttcactgtggaggcatgcttcttctacgaagcaaaacctgcatcttac
agcccgagactcacaatcagctataccgtcgaggcagatggagaacgcaggaaacagggg
ctgccctccagagctatgttcaacaaatcccacaccgacgtggactaccagtttaacggc
accttggacctccgcggccaaaaacagaaagcatgcatcaatatcgtcaccaaactgaag
gacaatatcaaggacaagatgcgcagcattcccatcgaggtgtctgcagaaattgtgagt
actaaacgacagaaggtgaggaacggcctccctccactgatgcccatattggactcctcc
cagccgagcaaagacgtcattgaggtcaactttgtaaaagagggatgtggaagcgatcat
gtttgccggagtaacctgaagatggagtacaaactgtattacaaaccaaacaaccaggaa
aattacacagagttattacccaccaagaaaagcatccccgtgtttcacctgaactacgag
aagaaggacctggctatttgggtgagggtcaacaacatgaacggcgacgacgcttacgag
gcgaagctggtgggcaccttccccgatggggtgtcgtattctggagtccgctcacagcaa
acaacggcggagaagccgatcatctgcacagccaatcagaacggctctcaggcagactgt
gagctggggaatccttttaagagcaactccacgactacattttacatcatcctgagcact
tctggtatgacgctgaacaccacggagattgacattgacctgcagctccaaacgacaagc
gtgcaagacaaccttgcttccgttaaagtaaaggttaaagtaatcattgaattgccgtta
tctgtctctggcgaggccaaccctaatcaggtgtccttcggaggtgtcgtgaaaggtgaa
agtgccatgaagacagaagaagagattggaagtttgattaactacacattcagaataaac
aacgtgtggaaaactctgacgcatcctgtcaaagcctcgctgcgcattcagtggcccaag
tttaataaacatgggaagtggcttctgtacctggtgaagatctcctctcctggaccgcag
gagatcctctgctccccagagtctgagatcaactctctcaaacacatccgggagtcgtct
gcgtccaggaccaaacgagaaattggagagaggaaacctgtcagcaaaatgtcgtcactg
tcgggcaaaaataaagtactgtcatgtggcaaggacatccaatgtgtggagctcagttgc
cctctgcagggcctcgacggtacagcagttgagctgaggtctcgcctctggaactcgacc
tttattgaggattacgcctctctctcatacttggaaatcgttgtgaaggcctcactcgtc
ttgcagggtcagcctaacaacatgatcctgagaactcctgacactgaagtgaaagtgaca
gtgacttcagagggtgccgtggcacagcacaccggagttccctggtggatcatcctggtg
gctgttcttgcaggcatcttgattttggctttgttggtgtttcttctctggaagtgtgga
ttcttcaaacgctccaagcgtgacgacagcgtgccgcgttaccacgccattaggattaga
aaggaaacccccgagtacaaagacggcacagtgaagcttgatgctttcgagaggaagcag
tggatgacctcttggattgacaatgaaagttactcataa

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