Acanthopagrus latus (yellowfin seabream): 119025405
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Entry
119025405 CDS
T08233
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119025405 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119025405 (zcchc7)
03016 Transfer RNA biogenesis [BR:
alat03016
]
119025405 (zcchc7)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
119025405 (zcchc7)
Transfer RNA biogenesis [BR:
alat03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
119025405 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Chisel
Arm-DNA-bind_4
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
119025405
NCBI-ProteinID:
XP_036964834
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All DBs
Position
1:complement(15306154..15356640)
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AA seq
654 aa
AA seq
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MYCSYQDREELEDDLYQEGDGDSDESEANSELEFHLYSQLHYSSNAGDTGEQVDREEEAA
CRENQQPEVPVKSADVDRERKHNGESTPSSLEISKLLQNLKKEERRETEERRGKKRKSTP
KDQRSSSSFFEEVIVIDSSPNVISISDDTADDDEEGVCALKGQSSQRVQTSTPAREVTQK
RKGTPGKPVIVDISSSESDSDLSSDSEDLENWMILGRGNQDGDQTISLNLEGEDSISLDL
EEDFDSRAGVGEKKGGSWLVSAKDKEAQIYNKDKGARVVVQRLSNRYYTAKSVQCRNCNK
HGHLSKSCPEPKKKSCFLCGAQGHQVSQCPNRHCSNCGLPGHLYDSCSEGAYWHKQCHRC
GMTGHFFDACPEIWRQYHITTKKMSKMGVPQKKKGGDRGRTPAYCYNCSRKGHYGHACTR
QRMFNGTYPSTPFINRYDTVEDIERRQHRIGLKVQELQKNGNFPAGPLTPRTPGPPKKKQ
KINHKSNHTPHKSPNNSKPSPSHIFFNDTHDFMAPTPRTYKSKKHKQQESSSNVKAWKPK
RPVPTSRNPPAKLIFDEADDFPRGGGRAASLEIKKKKRRRKPRRAASAAPVGHKDSKADR
RSWTGEMHGSEPKPEKAKRKRGFKNKKFAEKKAATKTHPTDENLFLIKQRKRSR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtactgttcgtaccaggatcgagaggagttggaggatgatctctatcaagagggtgat
ggggattccgatgagtcggaggccaacagcgagctggagtttcacctctatagccagctc
cactattcttctaatgctggggatactggggagcaggtggacagagaagaggaagcggcc
tgtagggaaaaccagcagcctgaggttcctgtgaagtctgcagatgttgacagagaacgc
aaacacaatggagaaagtacgccttcgtcacttgaaataagcaagctgctgcaaaacctg
aagaaggaggagaggagggagactgaggagagaaggggtaaaaagaggaaaagtacccct
aaagatcagaggtcatcttcatcttttttcgaggaagtcatcgtgatcgactccagccct
aatgtcatctccatctctgacgacactgctgatgatgacgaggaaggtgtctgtgcctta
aaggggcaaagctcacagcgggtacagacttccacccctgcccgagaggtaacccagaaa
aggaaggggactcctggtaagccagtgattgtggacatcagcagctcagagtctgattcc
gatttgtcatctgattcggaagatctggagaactggatgatcctgggtcgaggtaatcag
gatggagaccagaccatctcacttaacctggagggagaggactccatctcactcgacctg
gaggaagactttgacagccgtgcaggtgttggagaaaaaaaagggggcagctggttggtc
tctgcaaaggacaaggaggctcagatctataacaaagacaagggtgccagggtagtggtt
cagcgtctgtcaaacagatactacaccgccaagagtgtccaatgtagaaactgcaacaag
catggacatctctccaagagctgccctgagcccaaaaagaagtcctgcttcctctgtggc
gcccaaggccaccaggtcagtcagtgtcccaataggcactgcagcaactgtggcctgcct
ggacacctctacgactcctgcagcgagggagcgtactggcataaacagtgtcaccgttgt
gggatgacggggcacttctttgacgcttgtccagagatctggaggcagtatcacatcacg
actaagaaaatgtctaaaatgggtgttcctcaaaagaagaagggaggagaccggggtcgg
acccccgcctactgctacaactgctccaggaagggacactatggccacgcatgtacacgg
cagagaatgttcaacggaacatatccatccaccccgttcatcaaccgctatgacactgtg
gaggacatcgagcgcagacaacacaggattgggttgaaggttcaagaattgcagaaaaat
ggcaatttccctgccggtccactgacccctcgcactccaggaccaccgaagaagaaacag
aaaatcaaccataagtctaaccacacacctcacaaaagtcctaacaacagcaaacccagc
ccaagccacatcttttttaatgacacacatgactttatggccccgacacccagaacatat
aaatccaaaaagcacaagcaacaggaaagcagcagcaatgtgaaagcatggaaacccaag
agaccagtgcccacctcgagaaacccaccagctaaactaattttcgatgaggcagatgac
tttcccagaggtggaggcagagcggcgagcttggagataaagaagaagaaaaggaggagg
aaaccaaggcgagctgcttcagcagcaccagtgggacacaaagatagcaaagcagaccgt
cgcagttggactggagagatgcacgggtcagagccaaagccagagaaagcgaagaggaaa
agggggtttaaaaacaagaagtttgctgagaaaaaagctgccacaaagacgcacccgacg
gatgaaaacctgtttctcattaaacagaggaaacgcagcagatag
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