Acanthopagrus latus (yellowfin seabream): 119025571
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Entry
119025571 CDS
T08233
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119025571 (smarcal1)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119025571 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF7480
Motif
Other DBs
NCBI-GeneID:
119025571
NCBI-ProteinID:
XP_036965140
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All DBs
Position
9:complement(17294064..17306110)
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AA seq
914 aa
AA seq
DB search
MSNQLTAEQQRKIEENRRKALERRAQRLGQTTSSNKQIPVGFGSASVQVQPPKHSVNSEA
ATLAHHREAHSPSAAPKPFVPPFKKDSQSFLNQNQDPKNQQLSSTGNRINHQSTLCNSAS
SRLIQVIDPLPQTRTQHVSSPVLSGGGSFGAKPAHPKSNFTPSSSGSFYRQTPKPAQSPV
AQLPSNSSTLNAVAAKKPAISVRGKCVAHTEGRFRIEVGYHAELIAVFKSIPSKNYDPAT
KMWSFSLEDYRQLMEEAASIASVSLRPLEGMGAVDVAAATSRACDGAALGALLKLCNGWQ
KPGAVLQGQCILVSRTKFEVDVGYNADVIAAFKQMPTKNYDMKTRKWSFSLEDYKRLMDL
LSGIAAVEVEPLPRAIVQAFSASFDGSEARSVDVPEADLSSIDPSLTCSLMPFQREGVNF
AVSKQGRLLLADDMGLGKTVQAICIAAYYRNEWPLLVVAPSSVRFTWAEAFRRWLPSLSP
DSINVVVKAKDNLRSGLVNIVSYDLLSRTDKQQPGNPFSVLIMDESHFLKNIKTARCKAA
LPLLKAAKRVILLSGTPAMSRPSELYTQILAVRPTLFPRFHEFGVRYCAAKQMTWGWDYS
GSSNLGELKLLLEECLMLRRLKSEVLSQLPAKQRKVVTVTIDGINTRIKAALSAAAKQLS
KGHRNKMEEKEALLVFYNHTAEAKLQAIMEYITDMLEGGREKFLVFAHHKLVLDHITCEL
GKKNVGYIRIDGTTPSAERQQLCDKFQFSSKTCVAVLSITAANMGLTLHSADLVIFAELF
WNPGVLIQAEDRVHRIGQTSNVNIHYLVAKGSADDHLWPMIQEKMNVLEQVGLSESNLSD
KAVNSSFHSKDPNQRSIMEMFQRSFTAEDDMDEAILLEAANDWDDTPPENSSRQHRGTVE
QSPSKRSIKDFFSR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcagctgactgcagagcaacagcggaaaattgaggaaaacagacggaaggcc
ttagagagaagagcccaaagactaggtcagactaccagcagcaataagcagataccagta
ggcttcggcagtgcttcagtgcaggtacagcctcctaaacacagcgttaactcagaggct
gcaaccttagctcatcacagagaggcacacagcccatctgctgcaccgaaaccttttgtt
ccacctttcaaaaaagactcacagagctttttaaaccaaaatcaagacccaaagaatcaa
cagttatctagtactggcaaccgaatcaaccaccagagcactctgtgtaactctgcttcc
tcaagactgatacaagtcatcgacccactgcctcagacaagaactcaacatgtgagcagc
cccgtcttgtccggcggaggaagctttggtgcaaagccagctcatcccaagtctaacttc
acgcccagcagctctggctcgttctacaggcaaactcctaaacctgctcaaagtcctgtg
gcacagcttccctccaactcatcaactctcaatgccgtcgctgcaaaaaagccggccatc
tctgtaagagggaaatgtgtggctcacacagagggccgcttcagaatagaagtgggatac
cacgcagagctgattgcggtttttaaatccatcccctcgaagaactatgaccctgccaca
aagatgtggagtttcagcctggaggactatcgacagctaatggaggaagcggcttctatc
gcctccgtgtctctgaggcctctggaggggatgggcgccgtggacgtcgcagcggccacc
agtcgagcctgcgacggcgcggctcttggggcgctgctgaagctgtgcaacggctggcag
aaacctggagctgtcctgcagggccagtgcatcctggtgtctcggacgaagtttgaggtc
gatgtcggctacaatgctgacgtcattgcagcgttcaagcagatgccaacaaagaactac
gacatgaaaaccagaaagtggagcttttcactggaggattacaagagactcatggatctc
ctcagtgggatagcagcagtggaggtggagcctctgcccagggcaatagtccaggctttc
tctgccagctttgatgggagtgaggccaggtctgtagacgtccctgaggcagacctctcg
agcatcgacccctcgctcacctgcagcctcatgcccttccagagggagggagtcaatttt
gctgtgtctaaacaaggccgcctcctcctggctgatgacatgggcctgggaaagactgtg
caggccatctgcatagcagcctactacaggaacgagtggcccttgctggtggttgctccc
tcctctgtgcgattcacctgggctgaggccttcagacgctggcttccctccctgagtcct
gacagcatcaacgtggtggtgaaggccaaagacaacctgcgctctggtttggtcaacatc
gtcagctacgacctgctgagcaggacggacaagcagcagccgggaaaccccttcagcgtt
ctcatcatggatgagtctcacttcctgaagaacataaagacggctcgttgtaaagcagcc
ttgcctctgctgaaggccgcaaagagagtgattcttctgtctgggacccctgccatgtcc
agaccctcggagctctacactcagattctggcagtcagacccacactcttccctcgcttc
cacgagttcggggtgcgctactgcgccgccaaacagatgacctggggctgggactactcg
ggctcgtctaaccttggggagctgaagctgctgctggaggagtgtctgatgctgcgccgc
ctcaagtctgaagtcctctcgcagcttcccgctaaacaacgcaaggtcgtcacagtgact
atagacggcatcaacactcgcattaaagccgctctgtcagctgctgccaaacagctgagc
aaggggcaccgcaacaaaatggaagagaaggaagccctcctcgtcttttataaccacaca
gctgaagccaaactgcaagccatcatggagtacatcacagacatgctcgagggcgggagg
gagaagttcctcgtgttcgcccatcacaagttagtcctggatcatatcacctgcgaactg
ggaaaaaagaatgtcggctacatccggattgacggcaccactccatcagctgagcggcag
cagctctgtgacaagttccagttctcatccaaaacctgcgtggctgtgctttctatcact
gcagctaacatgggtctcaccctgcactctgctgacctggtgatcttcgctgagcttttc
tggaaccctggggttctcatccaggcagaggacagggtgcaccgtattggacaaaccagc
aatgtgaacattcactacctggttgccaagggatctgctgatgatcacctctggccaatg
atccaggaaaaaatgaatgtcttggagcaggttggtctgtctgagtcaaacctctcagac
aaagcagtgaacagcagcttccactctaaggacccaaaccagaggagcatcatggagatg
ttccagcggtctttcaccgcggaagatgacatggacgaagccatcctactggaggctgcg
aacgactgggatgacacgccgcctgaaaacagctcgcgtcaacaccgcggcacggtcgaa
caaagccccagcaaaaggagcattaaagactttttcagcagatga
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