Acanthopagrus latus (yellowfin seabream): 119025594
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Entry
119025594 CDS
T08233
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119025594 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alat03400
]
119025594 (xrcc5)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
119025594 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
119025594
NCBI-ProteinID:
XP_036965192
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All DBs
Position
9:complement(17353081..17361464)
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AA seq
725 aa
AA seq
DB search
MAASKSALVLCMDVGFSMSNSAPGEESPFEIAKKVIQKFVQRQVFAETKDELAVVLFGTD
STKNQLDQDDQYQNITVHRHLMVPDFELLEEIENQIHPESQQADWMDALVVSMDLLQTET
KGKKCSRLSIVLLTDLNTQVNSDQLDVIIENLKQTDITLQFFLPFPADENEEGGGDADNG
GPSHRGMGKGLSREQKEGLDMVKHVMLSLDEEDGLDQIYTFRNAIEQLCMFKRIERRPMP
WPCQLTIGSCVTIRIVGYKAVLEEKLKKSWATVDAQTNQKEDVKRETVYCLDDDNETEVQ
VDDTIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQNLVHRHHFMGSQVIKMFA
PKDDEHAGVALSAVIRALDELQMVAIVRYAYDRRSNPQVGAAFPCIKQDYECLMYVQLPF
MEDLRQFTFPSLDNNKKFIPSDTQLSAVDSLIDSMMLVEEDDDGKKIDMFKVHHIPHPGF
QRLFQCLHHRAVNPGTPLPPMEPWLKASLERPEVITERCQAPLEEVRKNFPLTEVEKKKK
LKTSAQIFGKDAEEPDAKKAKGDEEEEDYNLAVIAEGSVTSVGSVDPARDFRTLIKQKSL
PFGDVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKLGNAALYNSYLQSLKRSIP
NRRLEVFWDLLVQDAITLISKDEVEGSTVSKHEANQFLVSEEKKVEEAAPPVEDTGDVDD
LLDMM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatctaaatcagcgttggttctgtgcatggatgttgggttctccatgtccaac
tccgccccgggtgaagagtctccctttgaaattgccaaaaaagtcatccagaagtttgtt
cagcgccaggtttttgcagagactaaggatgaactggcagtggttctgtttggcacagac
tctaccaagaaccagctggaccaagacgaccagtaccagaacatcaccgtgcatcgtcac
ctcatggtgcctgactttgagcttctggaggaaatagagaatcagatccatccagagagt
cagcaggctgattggatggatgctcttgttgtctccatggatctcctccagacagaaaca
aaagggaagaagtgcagtcgtctcagcattgtcctcctgacagacctcaacactcaggtc
aactcagaccagctggacgtcattattgagaacctgaaacaaaccgacatcaccctgcag
ttttttttgcctttccctgcggatgaaaatgaagagggtggaggagatgcggacaatgga
ggtccaagtcaccgaggcatgggcaaaggtctgtccagggagcagaaggagggcctggac
atggtgaaacatgtcatgctgagccttgacgaggaggatggcctggatcagatttacacc
tttaggaatgcaatcgagcagctgtgtatgttcaagcgcattgagaggagacccatgccc
tggccctgtcagttgaccatcggcagctgtgtgacgattcgtattgttggatacaaagca
gtgttggaagagaaactgaagaaatcgtgggcaacagttgacgctcaaactaaccagaaa
gaagatgtgaagagggagaccgtctactgtctggatgatgacaatgagacagaggtgcag
gtggacgataccatccaaggttttcgatatggaagtgatattgttccattctctaaagtc
gatcaagagcagatgaagtacaagcatgatgggaagtgcttcgctgttctgggcttcacc
aaacagaacctggtccatcgccatcacttcatggggagtcaggtcatcaagatgtttgct
cccaaggatgatgagcacgcaggagtcgcgttgtccgctgtcatccgagcactagatgag
ctccaaatggtggccattgtacgttacgcttatgaccggcgcagcaaccctcaagtagga
gcagctttcccgtgcatcaaacaggattatgagtgtctgatgtacgtccagctgcccttc
atggaagacctcagacagtttacgttcccttctcttgacaacaacaaaaagttcattcca
tcagacacccaactgtctgccgtggactctctcattgactccatgatgttggtagaggag
gatgatgatggaaaaaaaattgacatgttcaaggtccatcacattccccaccctggcttc
cagaggctcttccagtgcctgcatcatcgggcagtaaaccctggcacccctctgccaccc
atggagccgtggctgaaggcctctcttgagcgccctgaagtgattactgaacgatgccag
gctccactagaggaggtgaggaagaactttcctctcacagaagtggagaagaaaaagaag
ctgaagacgagtgctcagatttttggcaaagatgctgaggagccagacgccaagaaggct
aaaggagacgaagaagaggaggattataacctggctgtcattgctgagggctctgttaca
tcggtgggaagtgtggatccagcccgagacttccgtactctgatcaagcagaagagtctt
ccattcggagatgtctgtcagcaactgactcataggatagagcagttgctaagcaacaag
aacacacactactacatgaaaagcatcacctgtatacaggcctttagagagcagtccgtg
aagctggggaatgctgcactgtacaacagctacctccagtccctgaaaagaagcatccca
aacagacggctggaggttttctgggacctgctcgttcaggatgccataacacttatcagc
aaggacgaggttgaaggaagcaccgtgtccaaacatgaagctaatcagtttctggtttct
gaggagaagaaagtggaagaggctgcaccaccagttgaagatactggagatgttgatgac
ttgctggacatgatgtaa
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