Acanthopagrus latus (yellowfin seabream): 119025674
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Entry
119025674 CDS
T08233
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alat03016
]
119025674 (lcmt2)
Enzymes [BR:
alat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
119025674 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
119025674 (lcmt2)
Transfer RNA biogenesis [BR:
alat03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119025674 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_6
Kelch_2
Kelch_1
RAG2
NANM
Motif
Other DBs
NCBI-GeneID:
119025674
NCBI-ProteinID:
XP_036965375
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Position
9:2664993..2672814
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AA seq
679 aa
AA seq
DB search
MPTAKRNKQKQGRDTAVQGTNDSSVVSKVSAAAQGYFHDVFLQHFVCKVARRAPLINRGY
YVRWRAVDHCVRRFLHITENCPNRQILSLGAGFDSLYFRLRADKALNRAVVFEVDFPDVS
RRKAALINSNSTLRGMFDTCVSSLTGPVYVSSGQYRLLGLDVREQTQVEEALGGAGLNWA
APTLILSEVVLTYMETRWSDAVISWVATVLPQSLFVVYEQIHPHDPFGLIMQDHFLKLNS
TLHALRQYPDTAAQRHRFLDKGWEQCVCLDMNVFYLGLVPEEERGRVESLEPFDEYEEWH
QKCSHYFILTASRGSLMAQALLPHAPVSPLTSICPSWSLIALSVQIIPVRMEGLGMATSL
LSPGQVLLTGGSSRGGRGAVPRILLRNQEGWRSVSVEPSVDLGVRLYHTATSLPGGGLVV
YGGRSSPLNPIRGLYKLTLDPSGPSGPRDSEDQDTVKLCVEEMVCTGDPPPARWRHTATV
VSHKGKDFLFVFGGKNQAEAVLGDGYFLSIDQQHWTEMPVEGAIPEARHCHSACSYQGGV
VVFGGLDRRGVPLGDTLVLKPNERGFSWETIELQPSPVPRYSHSAHVFGDKLVVVGGVWL
HSDGVPGGAIINLTTHSSVEFSLNTTPVPWPLMLHSFCSELMNPEEPELLLIGGGGNCFS
FGTHLNHQPVSVNLRPVLE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgcaaagagaaataaacagaagcaggggagggacaccgcagtacagggaacc
aacgacagcagtgtggtgagcaaagtgtctgctgcggcgcagggctacttccacgatgtc
ttcctacaacactttgtgtgcaaagtggccaggagagctccactcatcaacaggggctac
tatgtacgctggagggctgtggaccactgtgtgcggagattcctccacattactgaaaac
tgccccaatagacagattttgtcactgggcgcaggtttcgactctctgtattttcgccta
cgggcagataaagcacttaacagggctgttgtgtttgaagtagattttcctgatgtcagc
cggcgcaaggctgctctgatcaattcaaacagtacactgagggggatgtttgacacctgt
gtatcttcccttacaggacctgtatatgtatctagtggacagtaccgtctactggggttg
gatgttagagaacagacccaggtagaagaggctctgggtggggctgggctcaactgggct
gcccctacactaattctgtctgaagtggtgctaacatacatggaaacacgatggtctgat
gctgtcattagctgggtggccacggtcttgccgcagtcactctttgttgtgtatgagcag
atacacccacatgatccctttggtctgatcatgcaagaccattttctgaaactaaactca
actctacacgccctccgacagtacccagacactgctgcacagagacacaggttcctggac
aagggctgggagcagtgtgtgtgtctggatatgaatgtcttctacctcgggctggtccct
gaggaagagaggggcagagtggagagtctggagccttttgatgagtatgaggagtggcac
cagaaatgttcccactacttcattctcactgcatctcgaggctctttgatggcacaggct
ttactcccgcatgctccagtatctccattgacatccatttgcccatcatggagcctcata
gccctgagtgtacagatcataccagttcgtatggaagggctggggatggccacctccttg
ctcagccctgggcaggtcctgctaacaggaggctctagcagaggaggcaggggggcagtg
cccaggatcctcctcaggaatcaagaaggctggagatctgttagtgtggaaccatcagta
gatttgggtgttcgactctaccacacagctacctctctgcctggaggaggtcttgtggtg
tacggcggtcgctcctctccactcaatccaatcagaggcctttacaaactaaccctggac
cccagtggtccatctggtcctcgtgactcagaagaccaagacacagtgaaactttgtgta
gaggagatggtctgtacaggcgatccaccaccagcaagatggaggcacactgctactgtt
gtcagtcacaaaggcaaagactttctatttgtgtttggtgggaagaaccaagcagaggcc
gttctgggtgacggctacttcctgtctatagaccagcagcactggactgagatgccagta
gagggtgcaattccagaggcccgtcattgccactcggcatgctcataccagggaggtgtg
gtggtgtttggaggactagacagaagaggagtgccacttggggatacattggtgttaaag
ccaaatgagagaggcttctcctgggaaacaatagagttgcagccgtctcctgttcccagg
tactctcattctgcccatgtgtttggtgacaagctggttgtagttggtggagtttggctg
cattcagatggtgtaccaggtggtgccattatcaaccttaccacacacagcagtgtggag
ttcagtctgaacacgactcctgtgccctggcctctgatgctccactcattctgctcagaa
cttatgaacccagaggaaccagagctgctcctgataggtggaggaggaaactgtttttcc
tttggcactcatttgaaccatcagcctgtcagtgtgaacctcagacctgtgctggaatga
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